RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 SHISA6Q6ZSJ9 500 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 LDB1Q86U70 411 aaPredicted RBP8.45□□□□□ -1.06
PKP4-207ENST00000457109 VRK3Q8IV63 474 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 LMNTD1Q8N9Z9 388 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 LINC01555Q8NAE3 123 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 SPC24Q8NBT2 197 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 FLVCR1-AS1Q8TAF5 88 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 SUN3Q8TAQ9 357 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 PPP4R1Q8TF05 950 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 RERGQ96A58 199 aaPredicted RBP8.45□□□□□ -1.06
PKP4-207ENST00000457109 CABS1Q96KC9 395 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 ZNF778Q96MU6 729 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 LMF1Q96S06 567 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 TCF12Q99081 682 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 SLC26A1Q9H2B4 701 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 CCDC68Q9H2F9 335 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 RUBCNLQ9H714 662 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 SLC6A20Q9NP91 592 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 FAM114A2Q9NRY5 505 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 SAMD15Q9P1V8 674 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 MAU2Q9Y6X3 613 aa8.45□□□□□ -1.06
PKP4-207ENST00000457109 COL12A1Q99715 3063 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 NSG1A0A0A6YYJ2 146 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 ENO4A6NNW6 628 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 NRDCO43847 1150 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 PHF2O75151 1096 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 USP1O94782 785 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 CCNDBP1O95273 360 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 VAPBO95292 243 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 C1orf105O95561 183 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 ONECUT2O95948 504 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 CATP04040 527 aaKnown RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 HEXBP07686 556 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 CTSBP07858 339 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 ETS1P14921 441 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 FBLP22087 321 aaKnown RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 RPS3P23396 243 aaKnown RBP eCLIP8.44□□□□□ -1.06
PKP4-207ENST00000457109 PEBP1P30086 187 aaKnown RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 RPL22P35268 128 aaKnown RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 ARG2P78540 354 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 CDK16Q00536 496 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 NAA30Q147X3 362 aaPredicted RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 ZNF169Q14929 603 aaPredicted RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 OASLQ15646 514 aaKnown RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 HIF1AQ16665 826 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 TTLL9Q3SXZ7 439 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 CNSTQ6PJW8 725 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 FAM180AQ6UWF9 173 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 LINC00696Q6ZRV3 163 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 ZNF534Q76KX8 674 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 KBTBD2Q8IY47 623 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 PRSS58Q8IYP2 241 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 METTL27Q8N6F8 245 aaPredicted RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 SMPDL3AQ92484 453 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 MAGEB10Q96LZ2 347 aaPredicted RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 EBNA1BP2Q99848 306 aaKnown RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 ZFYVE21Q9BQ24 234 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 RBSNQ9H1K0 784 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 MRPS30Q9NP92 439 aaKnown RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 EIF2B3Q9NR50 452 aaKnown RBP8.44□□□□□ -1.06
PKP4-207ENST00000457109 SPATA7Q9P0W8 599 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 C3orf18Q9UK00 162 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 ZKSCAN5Q9Y2L8 839 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 MAST4O15021 2626 aa8.44□□□□□ -1.06
PKP4-207ENST00000457109 A0A1B0GUH1 482 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 MAGEB16A2A368 324 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 CTAGE9A4FU28 777 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 FITM1A5D6W6 292 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 PCDH17O14917 1159 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 CNOT3O75175 753 aaKnown RBP8.43□□□□□ -1.06
PKP4-207ENST00000457109 HPP00738 406 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 ESR1P03372 595 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 ZGLP1P0C6A0 271 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 ZSCAN5DPP0CG00 497 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 ICAM2P13598 275 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 EDN3P14138 238 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 FDXRP22570 491 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 MCM3P25205 808 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 TSFMP43897 325 aaKnown RBP8.43□□□□□ -1.06
PKP4-207ENST00000457109 BDKRB1P46663 353 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 EMP2P54851 167 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 CRADDP78560 199 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 THOC5Q13769 683 aaKnown RBP8.43□□□□□ -1.06
PKP4-207ENST00000457109 SEMA3AQ14563 771 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 NDUFA9Q16795 377 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 THEMIS2Q5TEJ8 643 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 MEI1Q5TIA1 1274 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 B3GNTL1Q67FW5 361 aaPredicted RBP8.43□□□□□ -1.06
PKP4-207ENST00000457109 HIST2H2BCQ6DN03 193 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 KIRREL2Q6UWL6 708 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 MICALCLQ6ZW33 695 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 NDUFAF7Q7L592 441 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 ADCK2Q7Z695 626 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 CUZD1Q86UP6 607 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 BCORP1Q8N888 145 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 ST6GALNAC3Q8NDV1 305 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 OR2L3Q8NG85 312 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 OR11G2Q8NGC1 345 aa8.43□□□□□ -1.06
PKP4-207ENST00000457109 OR1N1Q8NGS0 311 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms