RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FAM129BQ96TA1 746 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SEMA3CQ99985 751 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FXYD6Q9H0Q3 95 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TBC1D17Q9HA65 648 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ATP13A1Q9HD20 1204 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 C14orf119Q9NWQ9 140 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CKLFQ9UBR5 152 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MGAT4AQ9UM21 535 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM5Q9Y2B1 443 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 NUBP2Q9Y5Y2 271 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 C1orf167Q5SNV9 1468 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 LYRM1O43325 122 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 GABARAPO95166 117 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CYP2A6P11509 494 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF26P17031 533 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 RAB3AP20336 220 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 KLRK1P26718 216 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PTGER3P43115 390 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CENPAP49450 140 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF132P52740 706 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 INHBCP55103 352 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SOX10P56693 466 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 NCS1P62166 190 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 POLR2LP62875 67 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FLI1Q01543 452 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 HNRNPA0Q13151 305 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CDK5R2Q13319 367 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 AMHR2Q16671 573 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PARP15Q460N3 678 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SETMARQ53H47 684 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SIGIRRQ6IA17 410 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CXorf57Q6NSI4 855 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 GLB1LQ6UWU2 654 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SERPINA13PQ6UXR4 307 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 QSOX2Q6ZRP7 698 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ASB18Q6ZVZ8 466 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MTSS1LQ765P7 747 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 LINGO2Q7L985 606 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 GRAMD2AQ8IUY3 354 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CEP97Q8IW35 865 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 KDM1BQ8NB78 822 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 EDEM1Q92611 657 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 KIAA1143Q96AT1 154 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ZFP3Q96NJ6 502 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FCRL4Q96PJ5 515 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 DPYSL5Q9BPU6 564 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FDXACB1Q9BRP7 624 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TRIM36Q9NQ86 728 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FBXO8Q9NRD0 319 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 INTS7Q9NVH2 962 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 AIG1Q9NVV5 245 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FLRT1Q9NZU1 646 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TLR6Q9Y2C9 796 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PCDHGA11Q9Y5H2 935 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MN1Q10571 1320 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 XRN1Q8IZH2 1706 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TUBAL3A6NHL2 446 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 RIIAD1A6NNX1 92 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FAM25EA8MYX2 175 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 E9PAM4 449 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CLIC1O00299 241 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 XYLBO75191 536 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 IGSF6O95976 241 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 EPORP19235 508 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF10P21506 573 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CPN2P22792 545 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CA5AP35218 305 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 GRM5P41594 1212 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MAP2K4P45985 399 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 HMGCS2P54868 508 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 RPP38P78345 283 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SLC3A1Q07837 685 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 NPRL3Q12980 569 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 LAPTM5Q13571 262 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CAPSQ13938 189 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PAFAH1B3Q15102 231 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TBCEQ15813 527 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FAM189A2Q15884 450 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 DUOXA1Q1HG43 343 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF678Q5SXM1 525 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 HES5Q5TA89 166 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FKBP1CQ5VVH2 108 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 WDR53Q7Z5U6 358 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FAM83AQ86UY5 434 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CPNE8Q86YQ8 564 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 IGDCC3Q8IVU1 814 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF557Q8N988 423 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ATAD1Q8NBU5 361 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 REPS2Q8NFH8 660 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FBXO27Q8NI29 283 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 RHEBL1Q8TAI7 183 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PEX13Q92968 403 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TIFAQ96CG3 184 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MED8Q96G25 268 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 RADILQ96JH8 1075 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 APOLD1Q96LR9 279 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF416Q9BWM5 594 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 KCNH6Q9H252 994 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ASB8Q9H765 288 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms