RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 IL1RL1Q01638 556 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 CD300CQ08708 224 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 PGS1Q32NB8 556 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 AGAP7PQ5VUJ5 663 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 TTC23LQ6PF05 361 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 CCDC81Q6ZN84 652 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 MSANTD1Q6ZTZ1 278 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 PRSS48Q7RTY5 328 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 CADM3Q8N126 398 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 TTC29Q8NA56 475 aaPredicted RBP17.23■□□□□ 0.35
PTPN6-204ENST00000456013 ZNF540Q8NDQ6 660 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 SELENOMQ8WWX9 145 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 TSSK3Q96PN8 268 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 HHIPQ96QV1 700 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 HTATIP2Q9BUP3 242 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 ACOT13Q9NPJ3 140 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 LATS2Q9NRM7 1088 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 AASDHPPTQ9NRN7 309 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 TMEM161AQ9NX61 479 aa17.23■□□□□ 0.35
PTPN6-204ENST00000456013 TRIM43BA6NCK2 446 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 RFXANKO14593 260 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 SEMG1P04279 462 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 AP1S1P61966 158 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 SLC14A1Q13336 389 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 MAD2L1BPQ15013 274 aaPredicted RBP17.22■□□□□ 0.35
PTPN6-204ENST00000456013 TSPYL5Q86VY4 417 aaPredicted RBP17.22■□□□□ 0.35
PTPN6-204ENST00000456013 SNX29P2Q8IUI4 249 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 CMTM7Q96FZ5 175 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 ABHD8Q96I13 439 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 TMEM165Q9HC07 324 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 THG1LQ9NWX6 298 aaKnown RBP17.22■□□□□ 0.35
PTPN6-204ENST00000456013 EVPLLA8MZ36 301 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 MYO1GB0I1T2 1018 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 AQP9O43315 295 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 IRF1P10914 325 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 SDC1P18827 310 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 TACR1P25103 407 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 MAPK1P28482 360 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 HOXA9P31269 272 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 GGTA1PQ4G0N0 100 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 CDKL4Q5MAI5 379 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 TMEM236Q5W0B7 351 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 ANKS3Q6ZW76 656 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 WBP2Q969T9 261 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 CRLS1Q9UJA2 301 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 SNX6Q9UNH7 406 aa17.22■□□□□ 0.35
PTPN6-204ENST00000456013 FADS2O95864 444 aaKnown RBP17.21■□□□□ 0.35
PTPN6-204ENST00000456013 FABP3P05413 133 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 SLC11A1P49279 550 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 TMED10P49755 219 aaKnown RBP17.21■□□□□ 0.35
PTPN6-204ENST00000456013 FCGRTP55899 365 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 NCS1P62166 190 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 DGCR6Q14129 220 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 PLEKHG7Q6ZR37 379 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 RHNO1Q9BSD3 238 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 PDP1Q9P0J1 537 aaPredicted RBP17.21■□□□□ 0.35
PTPN6-204ENST00000456013 RPS6KA6Q9UK32 745 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 TMED5Q9Y3A6 229 aa17.21■□□□□ 0.35
PTPN6-204ENST00000456013 KCNE1BA0A087WTH5 132 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 GLYATL1P3A0A0U1RQE8 302 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 TTC34A8MYJ7 566 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 NPIPB8E9PQR5 432 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 FAM20BO75063 409 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 CLDN7O95471 211 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 TRBC1P01850 177 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 NTRK1P04629 796 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 CBSLP0DN79 551 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 COL6A1P12109 1028 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 BPIP17213 487 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.34
PTPN6-204ENST00000456013 CBSP35520 551 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 RPIAP49247 311 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 FADDQ13158 208 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 CDKN3Q16667 212 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 GPR33Q49SQ1 333 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 LGALS12Q96DT0 336 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 SLIRPQ9GZT3 109 aaKnown RBP17.21■□□□□ 0.34
PTPN6-204ENST00000456013 ELOVL6Q9H5J4 265 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 VPS51Q9UID3 782 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 ITGB1BP2Q9UKP3 347 aa17.21■□□□□ 0.34
PTPN6-204ENST00000456013 EFNA1P20827 205 aaPredicted RBP17.2■□□□□ 0.34
PTPN6-204ENST00000456013 TRPC1P48995 793 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 VLDLRP98155 873 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 ELAVL2Q12926 359 aaKnown RBP17.2■□□□□ 0.34
PTPN6-204ENST00000456013 CHRNA6Q15825 494 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 SMN1Q16637 294 aaKnown RBP17.2■□□□□ 0.34
PTPN6-204ENST00000456013 VMACQ2NL98 169 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 PLEKHG6Q3KR16 790 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 KIAA1614Q5VZ46 1190 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 OR4F3Q6IEY1 312 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 ZCCHC8Q6NZY4 707 aaKnown RBP17.2■□□□□ 0.34
PTPN6-204ENST00000456013 PRSS55Q6UWB4 352 aaPredicted RBP17.2■□□□□ 0.34
PTPN6-204ENST00000456013 LRRC70Q7Z2Q7 622 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 HORMAD1Q86X24 394 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 RASAL3Q86YV0 1011 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 IPCEF1Q8WWN9 437 aaPredicted RBP17.2■□□□□ 0.34
PTPN6-204ENST00000456013 NELL1Q92832 810 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 SIGLEC11Q96RL6 698 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 SYT17Q9BSW7 474 aa17.2■□□□□ 0.34
PTPN6-204ENST00000456013 RNF38Q9H0F5 515 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms