RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF548Q8NEK5 533 aaPredicted RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 OR52E4Q8NGH9 312 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 UCMAQ8WVF2 138 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TRIM55Q9BYV6 548 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 UTP6Q9NYH9 597 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 SPATA7Q9P0W8 599 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 NTMQ9P121 344 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 XPR1Q9UBH6 696 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CRYL1Q9Y2S2 319 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 PCDHA9Q9Y5H5 950 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 COPG1Q9Y678 874 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 SLC30A1Q9Y6M5 507 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 NPEPPSL1A6NEC2 478 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 LILRA5A6NI73 299 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 UBXN8O00124 270 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 BTN3A3O00478 584 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 PPM1DO15297 605 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TRIM13O60858 407 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SLC25A14O95258 325 aaPredicted RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 VIMP08670 466 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 ACADSP16219 412 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TFEBP19484 476 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 RORAP35398 523 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 MVDP53602 400 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CRYBA2P53672 197 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 EPHA4P54764 986 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 IGLV3-21P80748 117 aaPredicted RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 TMPRSS15P98073 1019 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 GRIK2Q13002 908 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TSNQ15631 228 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 AARS2Q5JTZ9 985 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 OR52E8Q6IFG1 317 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 MRNIPQ6NTE8 343 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 Q6ZSR6 202 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 RPS27LQ71UM5 84 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 GOLGA7Q7Z5G4 137 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 VN1R4Q7Z5H5 301 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 RETREG3Q86VR2 466 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ZNF354CQ86Y25 554 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SLITRK4Q8IW52 837 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 YAF2Q8IY57 180 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ULK2Q8IYT8 1036 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 LILRA2Q8N149 483 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SPATA6LQ8N4H0 392 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 DNAJC22Q8N4W6 341 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ZNF514Q96K75 400 aaPredicted RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 C10orf90Q96M02 699 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SLC6A16Q9GZN6 736 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 MRPL46Q9H2W6 279 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 EPS8L2Q9H6S3 715 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 KCNK9Q9NPC2 374 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SERHLQ9NQF3 203 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 PRDM9Q9NQV7 894 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 EPHA6Q9UF33 1036 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 DNAJC16Q9Y2G8 782 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TMEM98Q9Y2Y6 226 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 C8GP07360 202 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ENO3P13929 434 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 PAMP19021 973 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 IL12AP29459 219 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 CA8P35219 290 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 SLC19A1P41440 591 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ARFIP2P53365 341 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PHC1P78364 1004 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PPARDQ03181 441 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 KLF10Q13118 480 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 STX3Q13277 289 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 SPATS1Q496A3 300 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 TTC31Q49AM3 519 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 IQCCQ4KMZ1 466 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ODF2Q5BJF6 829 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 AAGABQ6PD74 315 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 SLC36A4Q6YBV0 504 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 DET1Q7L5Y6 550 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PRSS42Q7Z5A4 293 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 TBC1D21Q8IYX1 336 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 CARFQ8N187 725 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 NKAPQ8N5F7 415 aaKnown RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 LMNTD1Q8N9Z9 388 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 NCSTNQ92542 709 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 COPS8Q99627 209 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 TUBB6Q9BUF5 446 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 TMEM168Q9H0V1 697 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 SARS2Q9NP81 518 aaKnown RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 SDR39U1Q9NRG7 319 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 ANKMY1Q9P2S6 941 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 VTI1BQ9UEU0 232 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ZFP69BQ9UJL9 534 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 CNOT11Q9UKZ1 510 aaKnown RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 ACOT9Q9Y305 439 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PCDHGA5Q9Y5G8 931 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 B3GALT1Q9Y5Z6 326 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 KMT2BQ9UMN6 2715 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 TMEM233B4DJY2 109 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 TLR4O00206 839 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 KMOO15229 486 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 FFAR2O15552 330 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 CCDC22O60826 627 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 FZD7O75084 574 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms