RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ALDOAP04075 364 aaKnown RBP26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 MAGP20916 626 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 CNTFP26441 200 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 ATP6V0D1P61421 351 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 TSNQ15631 228 aaKnown RBP26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 AGTRAPQ6RW13 159 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 ADAMTSL2Q86TH1 951 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 BPHLQ86WA6 291 aaPredicted RBP26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 ISL2Q96A47 359 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 ZNF501Q96CX3 271 aaPredicted RBP26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 MIPEPQ99797 713 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 FAM60AQ9NP50 221 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 SNX15Q9NRS6 342 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 OARD1Q9Y530 152 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 KLK4Q9Y5K2 254 aa26.95■■□□□ 1.9
SMARCC1-203ENST00000454240 ACACAQ13085 2346 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 KRT38O76015 456 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 C2P06681 752 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 CD82P27701 267 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 RPA3P35244 121 aaPredicted RBP26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 GMPRP36959 345 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 SERPINB8P50452 374 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 PCBP4P57723 403 aaKnown RBP26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 DLG1Q12959 904 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 CSHL1Q14406 222 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 GPR19Q15760 415 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 ZXDCQ2QGD7 858 aaPredicted RBP26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 ADGRD1Q6QNK2 874 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 CDHR3Q6ZTQ4 885 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 TAOK1Q7L7X3 1001 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 UBLCP1Q8WVY7 318 aaPredicted RBP26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 ZUFSPQ96AP4 578 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 PARD6BQ9BYG5 372 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 SPRY4Q9C004 299 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 UNKQ9C0B0 810 aaKnown RBP26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 INTS7Q9NVH2 962 aaKnown RBP26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 UTP6Q9NYH9 597 aaKnown RBP26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 KLHL20Q9Y2M5 609 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 ACOT9Q9Y305 439 aa26.94■■□□□ 1.9
SMARCC1-203ENST00000454240 CELSR3Q9NYQ7 3312 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 PABPN1LA6NDY0 278 aaKnown RBP26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 TARM1B6A8C7 271 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 TYK2P29597 1187 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 GRIA3P42263 894 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 MAGEA12P43365 314 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 YBX1P67809 324 aaKnown RBP26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 CDKL1Q00532 357 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 FCRL6Q6DN72 434 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 FIGLAQ6QHK4 219 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 TBC1D1Q86TI0 1168 aaPredicted RBP26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 PPP1R3BQ86XI6 285 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 AENQ8WTP8 325 aaKnown RBP26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 FBXL8Q96CD0 374 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 ACAT2Q9BWD1 397 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 ATG10Q9H0Y0 220 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 RARRES3Q9UL19 164 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 RAXQ9Y2V3 346 aa26.93■■□□□ 1.9
SMARCC1-203ENST00000454240 SPTBP11277 2137 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 A0A087X1B8 175 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 IQCJ-SCHIP1C9J366 451 aaPredicted RBP26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 GUCA1CO95843 209 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 CMPK1P30085 196 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 EIF2S3P41091 472 aaKnown RBP26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 GABRA4P48169 554 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 TBPL1P62380 186 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 PRDX1Q06830 199 aaKnown RBP26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 TSTA3Q13630 321 aaPredicted RBP26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 LARP7Q4G0J3 582 aaKnown RBP eCLIP26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 DNAJC22Q8N4W6 341 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 ZNF248Q8NDW4 579 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 OR8K5Q8NH50 307 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 ATL1Q8WXF7 558 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 KIAA1191Q96A73 305 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 PTERQ96BW5 349 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 FCRL4Q96PJ5 515 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 CCDC177Q9NQR7 707 aaPredicted RBP26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 IGSF5Q9NSI5 407 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 TAC3Q9UHF0 121 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 TLK1Q9UKI8 766 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 ZMIZ1Q9ULJ6 1067 aa26.92■■□□□ 1.9
SMARCC1-203ENST00000454240 URB1O60287 2271 aaKnown RBP26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 A0A096LPK6 155 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 LTA4HP09960 611 aaKnown RBP26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 NAE1Q13564 534 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 OR4D1Q15615 310 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 LGSNQ5TDP6 509 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 ICE2Q659A1 982 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 EMBQ6PCB8 327 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 ZFAND4Q86XD8 727 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 CENPLQ8N0S6 344 aaPredicted RBP26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 OR56A3Q8NH54 315 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 CCDC77Q9BR77 488 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 SGPP1Q9BX95 441 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 NMRAL1Q9HBL8 299 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 RAB21Q9UL25 225 aa26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 MAP1BP46821 2468 aaKnown RBP26.91■■□□□ 1.9
SMARCC1-203ENST00000454240 TRIM49D1C9J1S8 452 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 HCRTR1O43613 425 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 KRT37O76014 449 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 CCNDBP1O95273 360 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms