RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SLC40A1Q9NP59 571 aa4.99□□□□□ -1.61
SBDSP1-204ENST00000453858 OLFML3Q9NRN5 406 aa4.99□□□□□ -1.61
SBDSP1-204ENST00000453858 CDYLQ9Y232 598 aa4.99□□□□□ -1.61
SBDSP1-204ENST00000453858 HEATR5AQ86XA9 2040 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 IGLV3-10A0A075B6K4 115 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 A0A096LNT2 108 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 A0A1B0GTH9 108 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 OR5H15A6NDH6 313 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 LRRIQ3A6PVS8 624 aaPredicted RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 IKBKBO14920 756 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 MAPK13O15264 365 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 ZNF749O43361 778 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 GCNT3O95395 438 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 ADCY5O95622 1261 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 MLYCDO95822 493 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 TRUB2O95900 331 aaKnown RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 CYP1A1P04798 512 aaPredicted RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 PRR35P0CG20 571 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 SRD5A1P18405 259 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 AGXTP21549 392 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 MC4RP32245 332 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 ZFP36L2P47974 494 aaKnown RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 RPL34P49207 117 aaKnown RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 SNRPD1P62314 119 aaKnown RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 ADCY2Q08462 1091 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 ACKR1Q16570 336 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 ZNF766Q5HY98 468 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 C1orf220Q5T0J3 134 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 ABHD17BQ5VST6 288 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 KANK2Q63ZY3 851 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 TRMT10BQ6PF06 316 aaKnown RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 STK32CQ86UX6 486 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 REXO1L1PQ8IX06 675 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 CARFQ8N187 725 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 AMER2Q8N7J2 671 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 STPG3Q8N7X2 389 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 AVL9Q8NBF6 648 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 CLRN3Q8NCR9 226 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 UBA3Q8TBC4 463 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 RAD54LQ92698 747 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 SCMH1Q96GD3 660 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 PPM1MQ96MI6 270 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 AGAP2Q99490 1192 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 C17orf62Q9BQA9 187 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 TTYH2Q9BSA4 534 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 TACO1Q9BSH4 297 aaKnown RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 HES7Q9BYE0 225 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 TP63Q9H3D4 680 aaPredicted RBP4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 CUEDC2Q9H467 287 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 POT1Q9NUX5 634 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 KCMF1Q9P0J7 381 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 DNAJC16Q9Y2G8 782 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 ALPK2Q86TB3 2170 aa4.98□□□□□ -1.61
SBDSP1-204ENST00000453858 DDX3XO00571 662 aaKnown RBP eCLIP4.97□□□□□ -1.611e-6■■■■■ 29.4
SBDSP1-204ENST00000453858 FFAR3O14843 346 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 KDM1AO60341 852 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 PFKFB2O60825 505 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 USP1O94782 785 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 ZBTB11O95625 1053 aaPredicted RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 KRT18P05783 430 aaKnown RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 SP1P08047 785 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 ITGA2P17301 1181 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 TRIM21P19474 475 aaKnown RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 ITGAXP20702 1163 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 UQCRC1P31930 480 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 ACVRL1P37023 503 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 CDKN1CP49918 316 aaPredicted RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 CLCNKAP51800 687 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 NR0B1P51843 470 aaKnown RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 AP3M2P53677 418 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 SLC8A3P57103 927 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 SESN2P58004 480 aaPredicted RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 BST2Q10589 180 aaKnown RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 BIRC3Q13489 604 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 GPR18Q14330 331 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 GOLGA7BQ2TAP0 167 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 FAM102AQ5T9C2 384 aaPredicted RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 PRAMEF9Q5VWM5 478 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 RTL6Q6ICC9 239 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 HIBCHQ6NVY1 386 aaPredicted RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 ERAP2Q6P179 960 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 ARHGAP12Q8IWW6 846 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 KLHL36Q8N4N3 616 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 RFLNBQ8N5W9 214 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 MDS2Q8NDY4 140 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 LINC01560Q8TB33 94 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 ZFAND2BQ8WV99 257 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 SMPDL3BQ92485 455 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 RNASE6Q93091 150 aaKnown RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 SNX21Q969T3 373 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 RBMXL1Q96E39 390 aaKnown RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 COX14Q96I36 57 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 CD180Q99467 661 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 SHARPINQ9H0F6 387 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 BARX1Q9HBU1 254 aaPredicted RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 MPP6Q9NZW5 540 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 SLC12A6Q9UHW9 1150 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 ING1Q9UK53 422 aaPredicted RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 TSPAN16Q9UKR8 245 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms