RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ABTB1Q969K4 478 aaPredicted RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 KIAA1191Q96A73 305 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 ZUFSPQ96AP4 578 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 LINC00615Q96LM1 132 aaPredicted RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 TMEM79Q9BSE2 394 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 WDR55Q9H6Y2 383 aaPredicted RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 FAM8A1Q9UBU6 413 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 MBD1Q9UIS9 605 aaPredicted RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 BLOC1S6Q9UL45 172 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 PAIP2BQ9ULR5 123 aaKnown RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 RNF112Q9ULX5 631 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 COL6A3P12111 3177 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 C17orf113A0A1B0GUU1 675 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 NPEPPSL1A6NEC2 478 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 SYCE1LA8MT33 242 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 TARM1B6A8C7 271 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 TK2O00142 265 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 TSPAN12O95859 305 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 MPC1LP0DKB6 136 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 MYF6P23409 242 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 RABIFP47224 123 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 CLDN2P57739 230 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 CBX3Q13185 183 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 NFATC4Q14934 902 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 DUS1LQ6P1R4 473 aaKnown RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 ADAMTSL2Q86TH1 951 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 ISCA2Q86U28 154 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 FRMD1Q8N878 549 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 SKA2Q8WVK7 121 aaPredicted RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 GLMNQ92990 594 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 CCDC126Q96EE4 140 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 WDR92Q96MX6 357 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 CD300AQ9UGN4 299 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 MOSPD1Q9UJG1 213 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 TSR3Q9UJK0 312 aaKnown RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 G3BP2Q9UN86 482 aaKnown RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 INVSQ9Y283 1065 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 CEP192Q8TEP8 1941 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 TECTAO75443 2155 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 EML5Q05BV3 1969 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 A0A1W2PPC4 97 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 PABPN1LA6NDY0 278 aaKnown RBP15.42■□□□□ 0.06
SNX17-204ENST00000453453 POM121BA6NF01 834 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 SDHDO14521 159 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 KERAO60938 352 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 LILRB5O75023 590 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 ATP6V1G1O75348 118 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 POP7O75817 140 aaKnown RBP15.42■□□□□ 0.06
SNX17-204ENST00000453453 CHRNGP07510 517 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 PORP16435 677 aaPredicted RBP15.42■□□□□ 0.06
SNX17-204ENST00000453453 MAPK9P45984 424 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 NME5P56597 212 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 LRP8Q14114 963 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 C8orf82Q6P1X6 216 aaPredicted RBP15.42■□□□□ 0.06
SNX17-204ENST00000453453 PRMT9Q6P2P2 845 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 GCNT7Q6ZNI0 430 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 NEK10Q6ZWH5 1172 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 FRA10AC1Q70Z53 315 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 AMZ2Q86W34 360 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 GALNT13Q8IUC8 556 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 LSMEM2Q8N112 164 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 TMEM151AQ8N4L1 468 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 TMEM145Q8NBT3 493 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 TFAP2CQ92754 450 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 ATP6V1E2Q96A05 226 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 COX4I2Q96KJ9 171 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 SPAG4Q9NPE6 437 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 PRMT8Q9NR22 394 aaPredicted RBP15.42■□□□□ 0.06
SNX17-204ENST00000453453 ZDHHC2Q9UIJ5 367 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 SLC17A4Q9Y2C5 497 aa15.42■□□□□ 0.06
SNX17-204ENST00000453453 hCG_2014768A0A024R1R8 64 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 MGAT4DA6NG13 374 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 AQP12BA6NM10 295 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 BBIP1A8MTZ0 92 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 METTL12A8MUP2 240 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 S100BP04271 92 aaPredicted RBP15.41■□□□□ 0.06
SNX17-204ENST00000453453 ATP5F1P24539 256 aaPredicted RBP15.41■□□□□ 0.06
SNX17-204ENST00000453453 CD27P26842 260 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 PSMD7P51665 324 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 PFN3P60673 137 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 GALNT1Q10472 559 aaPredicted RBP15.41■□□□□ 0.06
SNX17-204ENST00000453453 GBX1Q14549 363 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 TSNQ15631 228 aaKnown RBP15.41■□□□□ 0.06
SNX17-204ENST00000453453 ZNF829Q3KNS6 432 aaPredicted RBP15.41■□□□□ 0.06
SNX17-204ENST00000453453 PLA2G4EQ3MJ16 856 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 NHSL2Q5HYW2 709 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 NXNQ6DKJ4 435 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 ERMP1Q7Z2K6 904 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 SLC22A9Q8IVM8 553 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 AQP12AQ8IXF9 295 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 OR56A4Q8NGH8 313 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 OR2L2Q8NH16 312 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 PNPT1Q8TCS8 783 aaKnown RBP15.41■□□□□ 0.06
SNX17-204ENST00000453453 EXT2Q93063 718 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 PTERQ96BW5 349 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 ROPN1LQ96C74 230 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 ISOC1Q96CN7 298 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 BMFQ96LC9 184 aa15.41■□□□□ 0.06
SNX17-204ENST00000453453 TUBA1CQ9BQE3 449 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms