RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 TNPO3Q9Y5L0 923 aaKnown RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 ARHGEF17Q96PE2 2063 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 CCDC88CQ9P219 2028 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 H0YHG0 523 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 MRASO14807 208 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 FFAR3O14843 346 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 GPR42O15529 346 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 PEX1O43933 1283 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 B4GALT2O60909 372 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 HOXB3P14651 431 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 SLC7A2P52569 658 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 OR4D2P58180 307 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 RHDQ02161 417 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 HSPA14Q0VDF9 509 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 MAPK11Q15759 364 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CATSPEREQ5SY80 951 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 UGT2A3Q6UWM9 527 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 UBE3DQ7Z6J8 389 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 OR4K1Q8NGD4 311 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 TESCQ96BS2 214 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CCDC124Q96CT7 223 aaKnown RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 SPDL1Q96EA4 605 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CCDC115Q96NT0 180 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CPPED1Q9BRF8 314 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 INPP5KQ9BT40 448 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 SLC25A23Q9BV35 468 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 SPAG4Q9NPE6 437 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 AGPAT4Q9NRZ5 378 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 EBF1Q9UH73 591 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 POLR3HQ9Y535 204 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 PRMT3O60678 531 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 VPS4BO75351 444 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 IGLV3-19P01714 112 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 VARSP26640 1264 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 POLR2JP52435 117 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 PDE7AQ13946 482 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 DOC2AQ14183 400 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 GAS6Q14393 721 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 IL27RAQ6UWB1 636 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 C16orf89Q6UX73 402 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 NRROSQ86YC3 692 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 GALNT13Q8IUC8 556 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 SLC22A18ASQ8N1D0 253 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 TIFAQ96CG3 184 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 ABHD8Q96I13 439 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 SLC29A1Q99808 456 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 CACYBPQ9HB71 228 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 GPRC5BQ9NZH0 403 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 NOP53Q9NZM5 478 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 TMEM98Q9Y2Y6 226 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 PRAMEF25A6NGN4 478 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 NR5A2O00482 541 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 DFNA5O60443 496 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 OR56A5P0C7T3 313 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 EIF2B5Q13144 721 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 C16orf72Q14CZ0 275 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 RBBP7Q16576 425 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 CYP2A13Q16696 494 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 FNDC3BQ53EP0 1204 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 C1orf146Q5VVC0 180 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 TMEM220Q6QAJ8 160 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 EP400NLQ6ZTU2 488 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 ARMCX6Q7L4S7 300 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 THOC6Q86W42 341 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 TMEM126BQ8IUX1 230 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 ARHGEF39Q8N4T4 335 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 DTWD1Q8N5C7 304 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 ZNF740Q8NDX6 193 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 SREK1Q8WXA9 508 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 TSNARE1Q96NA8 513 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 BTBD1Q9H0C5 482 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 OR2AG1Q9H205 316 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 EFCAB1Q9HAE3 211 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 PLOD2O00469 737 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 SLC22A3O75751 556 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 AP1S2P56377 157 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 TBPL1P62380 186 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 MRPS22P82650 360 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 CLCA4Q14CN2 919 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 AP5B1Q2VPB7 878 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 KIAA1161Q6NSJ0 714 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 GALNT18Q6P9A2 607 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 TBPL2Q6SJ96 375 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 TDHQ8IZJ6 230 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 OR5AR1Q8NGP9 310 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 ZUFSPQ96AP4 578 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 TUBGCP3Q96CW5 907 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 ECSITQ9BQ95 431 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 TRIM54Q9BYV2 358 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 DPEP2Q9H4A9 486 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 GEMIN8Q9NWZ8 242 aaKnown RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 DPP7Q9UHL4 492 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 KLF15Q9UIH9 416 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 PSMD13Q9UNM6 376 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 NUP214P35658 2090 aaPredicted RBP6.37□□□□□ -1.39
USP46-202ENST00000451218 C19orf67A6NJJ6 358 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 FKBP6O75344 327 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 FUT4P22083 530 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 GDI1P31150 447 aa6.37□□□□□ -1.39
USP46-202ENST00000451218 GSK3BP49841 420 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms