RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 BHMG1C9JSJ3 638 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 SIGLEC6O43699 453 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NDUFS3O75489 264 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 BBOX1O75936 387 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PAPSS2O95340 614 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ADH1CP00326 375 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CFBP00751 764 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 IFNA1P01562 189 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 IL1AP01583 271 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RAF1P04049 648 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 A1BGP04217 495 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HIST1H2AGP0C0S8 130 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 CTPS1P17812 591 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HIST1H2ADP20671 130 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CYP2B6P20813 491 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 GSTM3P21266 225 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MAOAP21397 527 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TGM1P22735 817 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KDELR1P24390 212 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ADH6P28332 368 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 BAG6P46379 1132 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NKX2-5P52952 324 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 PNLIPRP1P54315 467 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CTAG1AP78358 180 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SPIBQ01892 262 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PTSQ03393 145 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KCNC4Q03721 635 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CYP24A1Q07973 514 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ORC1Q13415 861 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TNK1Q13470 666 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KCNJ11Q14654 390 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DUOXA2Q1HG44 320 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SPRED3Q2MJR0 410 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 AKIRIN2Q53H80 203 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FGD3Q5JSP0 725 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PXDC1Q5TGL8 231 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RPL22L1Q6P5R6 122 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 FIP1L1Q6UN15 594 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 LRRC69Q6ZNQ3 347 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MON1BQ7L1V2 547 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CUZD1Q86UP6 607 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HID1Q8IV36 788 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DNAJC10Q8IXB1 793 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 LINC00518Q8N0U6 118 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RAB42Q8N4Z0 105 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 EID2Q8N6I1 236 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZNF366Q8N895 744 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SAMD12Q8N8I0 201 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PXT1Q8NFP0 134 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZFP90Q8TF47 636 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 COPS5Q92905 334 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HIST1H2AHQ96KK5 128 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NOL4LQ96MY1 436 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 RNF157Q96PX1 679 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OR2M4Q96R27 311 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MTERF1Q99551 399 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 HIST1H2AJQ99878 128 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 H2AFJQ9BTM1 129 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ISCA1Q9BUE6 129 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MRPL4Q9BYD3 311 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 BTBD1Q9H0C5 482 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RBM38Q9H0Z9 239 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 OCEL1Q9H607 264 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SOX17Q9H6I2 414 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 UCK1Q9HA47 277 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NIT2Q9NQR4 276 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 AGPAT4Q9NRZ5 378 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ACOXLQ9NUZ1 547 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OXSMQ9NWU1 459 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KLHL28Q9NXS3 571 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CNOT2Q9NZN8 540 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 HACL1Q9UJ83 578 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 INTS6Q9UL03 887 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 CDC14AQ9UNH5 594 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MAFBQ9Y5Q3 323 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 POMT1Q9Y6A1 747 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MYH2Q9UKX2 1941 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MYH6P13533 1939 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FXYD6-FXYD2A0A087WZ82 144 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 BORCS7-ASMTA0A0B4J1R7 106 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 WASHC1A8K0Z3 465 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PP2D1A8MPX8 630 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 GSG1L2A8MUP6 293 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CXCR6O00574 342 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 BHLHE40O14503 412 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FOXO3O43524 673 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZBTB14O43829 449 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 XPNPEP2O43895 674 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ADAM11O75078 769 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 LYPLA1O75608 230 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ZMPSTE24O75844 475 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 STAU1O95793 577 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 LCKP06239 509 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 BMP4P12644 408 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TPT1P13693 172 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 IL1R1P14778 569 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TSPAN8P19075 237 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HDCP19113 662 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MAKP20794 623 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 EFNA1P20827 205 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms