RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 EIF3FO00303 357 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 RAD51CO43502 376 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 KLF7O75840 302 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 TSPAN12O95859 305 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 HBQ1P09105 142 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 PSMB5P28074 263 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 CASQ1P31415 396 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 CCR10P46092 362 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 POLE2P56282 527 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 ARL4CP56559 192 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 RPS18P62269 152 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 RPS15P62841 145 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 NFKB2Q00653 900 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 TAP2Q03519 686 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 FASTKD3Q14CZ7 662 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 UGT8Q16880 541 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 PTCHD3Q3KNS1 767 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 TTLL9Q3SXZ7 439 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 RBM20Q5T481 1227 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 TLDC1Q6P9B6 456 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 PAQR3Q6TCH7 311 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 SYT10Q6XYQ8 523 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 PIWIL4Q7Z3Z4 852 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 SYTL1Q8IYJ3 562 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 ZNF480Q8WV37 535 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 EEF1AKMT1Q8WVE0 214 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 APOBEC4Q8WW27 367 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 CLIP3Q96DZ5 547 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 DPH2Q9BQC3 489 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 MCMBPQ9BTE3 642 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 CCDC68Q9H2F9 335 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 SLC22A11Q9NSA0 550 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 GRHL1Q9NZI5 618 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 TSR3Q9UJK0 312 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 TUBD1Q9UJT1 453 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 CHMP2BQ9UQN3 213 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 PRRC2CQ9Y520 2896 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 IGKV1-8A0A0C4DH67 115 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 OR2A25A4D2G3 310 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 FITM1A5D6W6 292 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 NRP2O60462 931 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 CNOT3O75175 753 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 VPS26AO75436 327 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 SLC16A8O95907 504 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 SFTPCP11686 197 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 ITGAXP20702 1163 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 MCM3P25205 808 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 HSD17B2P37059 387 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 PGGT1BP53609 377 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 PDIA2Q13087 525 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 IL10RAQ13651 578 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 ZXDCQ2QGD7 858 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 FAM69BQ5VUD6 431 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 SYVN1Q86TM6 617 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 CPNE9Q8IYJ1 553 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 GPR135Q8IZ08 494 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 ZNF655Q8N720 491 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 ENDOVQ8N8Q3 282 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 SMPDL3AQ92484 453 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 NDNQ99608 321 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 MIPEPQ99797 713 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 ARHGAP9Q9BRR9 750 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 SYNPO2LQ9H987 977 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 FAM114A2Q9NRY5 505 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 WHRNQ9P202 907 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 TCFL5Q9UL49 500 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 POLHQ9Y253 713 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 VWA7Q9Y334 891 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 PSAT1Q9Y617 370 aa13.5□□□□□ -0.25
RTFDC1-204ENST00000449062 ANKRD12Q6UB98 2062 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 PCM1Q15154 2024 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 LOC105369274A0A096LPK9 316 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 LOC102723532A0A0G2JNH3 316 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 CDC14CA4D256 554 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 ZSCAN9O15535 394 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 SRPX2O60687 465 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 PNLIPRP1P54315 467 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 RELAQ04206 551 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 PRDX1Q06830 199 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 KCNAB2Q13303 367 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 TRADDQ15628 312 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 ZC3H12BQ5HYM0 836 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 FRMPD2BQ6IN97 320 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 ZNF425Q6IV72 752 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 MRPL14Q6P1L8 145 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 SUSD1Q6UWL2 747 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 MAATS1Q7Z4T9 603 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 ANKMY2Q8IV38 441 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 APLFQ8IW19 511 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 TMEM151BQ8IW70 566 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 OR4N4Q8N0Y3 316 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 FBXO36Q8NEA4 188 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 CFAP36Q96G28 342 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 DPH7Q9BTV6 452 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 SLC25A18Q9H1K4 315 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 SLC6A20Q9NP91 592 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 INTS7Q9NVH2 962 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 TAS2R13Q9NYV9 303 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms