RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 GGT1P19440 569 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 AQP1P29972 269 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 SHMT2P34897 504 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 WASP42768 502 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 HSPA13P48723 471 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 IRF8Q02556 426 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 SPIDRQ14159 915 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 DHCR24Q15392 516 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 RAVER1Q8IY67 606 aaKnown RBP14.38□□□□□ -0.11
SF1-211ENST00000448404 AP2M1Q96CW1 435 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 TMEM121BQ9BXQ6 578 aaPredicted RBP14.38□□□□□ -0.11
SF1-211ENST00000448404 PKD2L2Q9NZM6 624 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 CNOT11Q9UKZ1 510 aaKnown RBP14.38□□□□□ -0.11
SF1-211ENST00000448404 PCDHB3Q9Y5E6 796 aa14.38□□□□□ -0.11
SF1-211ENST00000448404 TCF20Q9UGU0 1960 aaKnown RBP14.37□□□□□ -0.11
SF1-211ENST00000448404 A0A0J9YVX5 310 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 KRT6AP02538 564 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 KRT6BP04259 564 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 CYP17A1P05093 508 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 ANXA6P08133 673 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 NUDT7P0C024 238 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 ELFN1P0C7U0 828 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 IL7RP16871 459 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 KRT6CP48668 564 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 CLCN2P51788 898 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 HPCAP84074 193 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 GRIK2Q13002 908 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 CATSPEREQ5SY80 951 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 DOK6Q6PKX4 331 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 RIMKLAQ8IXN7 391 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 ACAT2Q9BWD1 397 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 EMILIN2Q9BXX0 1053 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 CPEB1Q9BZB8 566 aaKnown RBP14.37□□□□□ -0.11
SF1-211ENST00000448404 NAA50Q9GZZ1 169 aaKnown RBP14.37□□□□□ -0.11
SF1-211ENST00000448404 PAIP1Q9H074 479 aaKnown RBP14.37□□□□□ -0.11
SF1-211ENST00000448404 TRPS1Q9UHF7 1281 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 CDC14AQ9UNH5 594 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 MRPS23Q9Y3D9 190 aaKnown RBP14.37□□□□□ -0.11
SF1-211ENST00000448404 LAMA1P25391 3075 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 SLC28A1O00337 649 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 RASAL1O95294 804 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 SERPINA1P01009 418 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 NTRK1P04629 796 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 ABCB1P08183 1280 aaPredicted RBP14.37□□□□□ -0.11
SF1-211ENST00000448404 VIPR1P32241 457 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 PIGAP37287 484 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 GALK1P51570 392 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 IL1RL1Q01638 556 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 DOC2AQ14183 400 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 SYTL3Q4VX76 610 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 ELMSAN1Q6PJG2 1045 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 SPESP1Q6UW49 350 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 IL17FQ96PD4 163 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 REXO4Q9GZR2 422 aaKnown RBP14.37□□□□□ -0.11
SF1-211ENST00000448404 OR2AG1Q9H205 316 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 VNN3Q9NY84 501 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 ZNF232Q9UNY5 417 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 CEPT1Q9Y6K0 416 aa14.37□□□□□ -0.11
SF1-211ENST00000448404 MAGEB17A8MXT2 336 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 ARNTLO00327 626 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 CXCR6O00574 342 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 MMP20O60882 483 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 TULP3O75386 442 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 S100A3P33764 101 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 BMPR1AP36894 532 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 SLC6A12P48065 614 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 NEDD8Q15843 81 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 SLC36A3Q495N2 470 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 FRG2Q64ET8 278 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 DUS1LQ6P1R4 473 aaKnown RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 SPRED1Q7Z699 444 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 BPIFB1Q8TDL5 484 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 TSPEARQ8WU66 669 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 MAL2Q969L2 176 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 DGCR14Q96DF8 476 aaKnown RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 ZNF641Q96N77 438 aaPredicted RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 FRG2BQ96QU4 278 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 DCUN1D5Q9BTE7 237 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 C9orf16Q9BUW7 83 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 IL23AQ9NPF7 189 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 PNPLA3Q9NST1 481 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 EBF1Q9UH73 591 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 IL36AQ9UHA7 158 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 TMEM98Q9Y2Y6 226 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 PPIL1Q9Y3C6 166 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 INSL6Q9Y581 213 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 SPINT1O43278 529 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 NUAK1O60285 661 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 MITFO75030 526 aaPredicted RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 PRSS23O95084 383 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 ZNF682O95780 498 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 GJA8P48165 433 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 HTRA4P83105 476 aaPredicted RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 TMEM115Q12893 351 aaPredicted RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 HENMT1Q5T8I9 393 aaKnown RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 LYPLAL1Q5VWZ2 237 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 LIPIQ6XZB0 460 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 VTCN1Q7Z7D3 282 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 GALNT5Q7Z7M9 940 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 THOC6Q86W42 341 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms