RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 PCDHGA8Q9Y5G5 932 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 ACTL7BQ9Y614 415 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 ZNF106Q9H2Y7 1883 aaKnown RBP11.2□□□□□ -0.62
LINC00408-201ENST00000447784 LRRK1Q38SD2 2015 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 MYLKQ15746 1914 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 FREM2Q5SZK8 3169 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 ASPMQ8IZT6 3477 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 A0A087WV48 116 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 A0A1W2PQM1 296 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 E7ENX8 843 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 UBXN8O00124 270 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 SPAG7O75391 227 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 IPO13O94829 963 aaKnown RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 CCNDBP1O95273 360 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 CDH3P22223 829 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 IMPA1P29218 277 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 OAS2P29728 719 aaKnown RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 PRDX3P30048 256 aaKnown RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 CMPK1P30085 196 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 KCNC1P48547 511 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 TAP2Q03519 686 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 GPS2Q13227 327 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 NAA25Q14CX7 972 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 PFKFB4Q16877 469 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 HSP90B2PQ58FF3 399 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 SNAP47Q5SQN1 464 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 PHF19Q5T6S3 580 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 AGBL2Q5U5Z8 902 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 SUSD1Q6UWL2 747 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 MBOAT1Q6ZNC8 495 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 FAM92BQ6ZTR7 304 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 SH2D5Q6ZV89 423 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 EXOC3L1Q86VI1 746 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 ADGRF3Q8IZF5 1079 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 PPFIBP2Q8ND30 876 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 OR4D9Q8NGE8 314 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 SNIP1Q8TAD8 396 aaKnown RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 DENND1AQ8TEH3 1009 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 RHBDF1Q96CC6 855 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 LIN37Q96GY3 246 aaPredicted RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 TMEM74Q96NL1 305 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 ATOH8Q96SQ7 321 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 MIPEPQ99797 713 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 NUDT22Q9BRQ3 303 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 HAUS8Q9BT25 410 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 SSU72Q9NP77 194 aaKnown RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 INTS7Q9NVH2 962 aaKnown RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 MKS1Q9NXB0 559 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 OGFRQ9NZT2 677 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 RAXQ9Y2V3 346 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 ANGPTL3Q9Y5C1 460 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 TNPO3Q9Y5L0 923 aaKnown RBP11.19□□□□□ -0.62
LINC00408-201ENST00000447784 AKAP13Q12802 2813 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 PLXNB3Q9ULL4 1909 aa11.19□□□□□ -0.62
LINC00408-201ENST00000447784 PTPRBP23467 1997 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 A8MU76 341 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 D6RAR5 112 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 AGPSO00116 658 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 MAP2K7O14733 419 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 ATP8B1O43520 1251 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 BRINP1O60477 761 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 CCNT2O60583 730 aaKnown RBP11.18□□□□□ -0.62
LINC00408-201ENST00000447784 STK16O75716 305 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 FKBP9O95302 570 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 MYL2P10916 166 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 ERGP11308 486 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 CPA3P15088 417 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 UGT2B7P16662 529 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 ATP5F1P24539 256 aaPredicted RBP11.18□□□□□ -0.62
LINC00408-201ENST00000447784 MPSTP25325 297 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 CCKBRP32239 447 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 PDX1P52945 283 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 ALDH18A1P54886 795 aaKnown RBP11.18□□□□□ -0.62
LINC00408-201ENST00000447784 INHBCP55103 352 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 ERVPABLB-1P60509 514 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 MAGOHP61326 146 aaKnown RBP11.18□□□□□ -0.62
LINC00408-201ENST00000447784 TBPL1P62380 186 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 GABREP78334 506 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 ABATP80404 500 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 EIF3IQ13347 325 aaKnown RBP11.18□□□□□ -0.62
LINC00408-201ENST00000447784 FASTKQ14296 549 aaKnown RBP11.18□□□□□ -0.62
LINC00408-201ENST00000447784 SLC5A12Q1EHB4 618 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 CACHD1Q5VU97 1274 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 PRAMEF13Q5VWM6 474 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 SPESP1Q6UW49 350 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 SLC22A9Q8IVM8 553 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 CARFQ8N187 725 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 PTGR2Q8N8N7 351 aaPredicted RBP11.18□□□□□ -0.62
LINC00408-201ENST00000447784 LMNTD1Q8N9Z9 388 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 LINC01555Q8NAE3 123 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 PDPRQ8NCN5 879 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 RDH11Q8TC12 318 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 SREK1Q8WXA9 508 aaKnown RBP11.18□□□□□ -0.62
LINC00408-201ENST00000447784 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 FGF11Q92914 225 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 CCDC126Q96EE4 140 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 ATP6V1G3Q96LB4 118 aa11.18□□□□□ -0.62
LINC00408-201ENST00000447784 ZNF578Q96N58 590 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms