RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 HMGCLL1Q8TB92 370 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 SMPDL3AQ92484 453 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 ZNF501Q96CX3 271 aaPredicted RBP11.48□□□□□ -0.57
RFC4-208ENST00000447345 TSPAN17Q96FV3 270 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 MED8Q96G25 268 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 CYTH2Q99418 400 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 ZPBPQ9BS86 351 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 TWSG1Q9GZX9 223 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 ATG10Q9H0Y0 220 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 PARVBQ9HBI1 364 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 SYTL2Q9HCH5 934 aa11.48□□□□□ -0.57
RFC4-208ENST00000447345 STOX2Q9P2F5 926 aaPredicted RBP11.48□□□□□ -0.57
RFC4-208ENST00000447345 LAMA5O15230 3695 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 POC1B-GALNT4F8VUJ3 575 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 SLC16A5O15375 505 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 PRICKLE3O43900 615 aaPredicted RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 SCRG1O75711 98 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 DLGAP3O95886 979 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 NTRK1P04629 796 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 CTSBP07858 339 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 HIST1H2AGP0C0S8 130 aaPredicted RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 MYBL2P10244 700 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 HIST1H2ADP20671 130 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 GRIA3P42263 894 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 ATP1A2P50993 1020 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 ARHGAP19Q14CB8 494 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 TSNQ15631 228 aaKnown RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFC4-208ENST00000447345 MANEAQ5SRI9 462 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 PRAMEF17Q5VTA0 474 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 FCRL6Q6DN72 434 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 RAPH1Q70E73 1250 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 TIPARPQ7Z3E1 657 aaKnown RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 RELL1Q8IUW5 271 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 CACNA2D3Q8IZS8 1091 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 NLGN4XQ8N0W4 816 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 NKAPQ8N5F7 415 aaKnown RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 FBXO15Q8NCQ5 510 aaPredicted RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 NLGN4YQ8NFZ3 816 aaPredicted RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 OR2A1Q8NGT9 310 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 MCOLN3Q8TDD5 553 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 EXT2Q93063 718 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 TCTN2Q96GX1 697 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 HIST1H2AHQ96KK5 128 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 HIST1H2AJQ99878 128 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 H2AFJQ9BTM1 129 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 SLC12A9Q9BXP2 914 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 DPH1Q9BZG8 443 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 B3GNT4Q9C0J1 378 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 POPDC3Q9HBV1 291 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 CPNE5Q9HCH3 593 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 SLC6A20Q9NP91 592 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 CCDC177Q9NQR7 707 aaPredicted RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 INTS7Q9NVH2 962 aaKnown RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 ARL15Q9NXU5 204 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFC4-208ENST00000447345 PILRAQ9UKJ1 303 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 V9GYY5 206 aaPredicted RBP11.47□□□□□ -0.57
RFC4-208ENST00000447345 CFAP47Q6ZTR5 3102 aa11.47□□□□□ -0.57
RFC4-208ENST00000447345 NBEAQ8NFP9 2946 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 ZNF839A8K0R7 811 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 E7ENX8 843 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 CCDC166P0CW27 439 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 CMPK1P30085 196 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.57
RFC4-208ENST00000447345 HSD17B2P37059 387 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 RAB10P61026 200 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 CXADRP78310 365 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 TAP2Q03519 686 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 CSHL1Q14406 222 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 MROH9Q5TGP6 573 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 PRAMEF13Q5VWM6 474 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 ICE2Q659A1 982 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 FIGLAQ6QHK4 219 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 AGTRAPQ6RW13 159 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 SBSNQ6UWP8 590 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 FRA10AC1Q70Z53 315 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 ADCK2Q7Z695 626 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 DTX1Q86Y01 620 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 NKD1Q969G9 470 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 CCDC138Q96M89 665 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 FCRL4Q96PJ5 515 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 PAFAH2Q99487 392 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 EGFL8Q99944 293 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 DPH7Q9BTV6 452 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 TRIM54Q9BYV2 358 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 SLC7A5P2Q9GIP4 190 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 MRPS30Q9NP92 439 aaKnown RBP11.46□□□□□ -0.57
RFC4-208ENST00000447345 CTNNAL1Q9UBT7 734 aa11.46□□□□□ -0.57
RFC4-208ENST00000447345 TMEM184BQ9Y519 407 aaPredicted RBP11.46□□□□□ -0.57
RFC4-208ENST00000447345 A0A087WUV0 522 aaPredicted RBP11.45□□□□□ -0.58
RFC4-208ENST00000447345 A0A0J9YVX5 310 aa11.45□□□□□ -0.58
RFC4-208ENST00000447345 NCF1BA6NI72 391 aaPredicted RBP11.45□□□□□ -0.58
RFC4-208ENST00000447345 NCF1CA8MVU1 366 aaPredicted RBP11.45□□□□□ -0.58
RFC4-208ENST00000447345 E7EQ34 232 aa11.45□□□□□ -0.58
RFC4-208ENST00000447345 CPNE3O75131 537 aaKnown RBP11.45□□□□□ -0.58
RFC4-208ENST00000447345 OR2B3O76000 313 aa11.45□□□□□ -0.58
RFC4-208ENST00000447345 WISP3O95389 354 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms