RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MTERF1Q99551 399 aaKnown RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 TRMT61BQ9BVS5 477 aaKnown RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 CCM2LQ9NUG4 571 aaPredicted RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 ARMC1Q9NVT9 282 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 GPR34Q9UPC5 381 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 F5P12259 2224 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 DHRS12A0PJE2 317 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 KCNH1O95259 989 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 PCCBP05166 539 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 UBTFL6P0CB48 400 aaPredicted RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 AMD1P17707 334 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 CLDN8P56748 225 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 CAMK2GQ13555 558 aaPredicted RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 MTX3Q5HYI7 312 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 IRAK1BP1Q5VVH5 260 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 GRHL2Q6ISB3 625 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 PNCKQ6P2M8 343 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 DOK6Q6PKX4 331 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 TRMT11Q7Z4G4 463 aaKnown RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 MSRB3Q8IXL7 192 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 CATSPER1Q8NEC5 780 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 SPDYE1Q8NFV5 336 aaPredicted RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 OR2L2Q8NH16 312 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 BTBD9Q96Q07 612 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 NR1H4Q96RI1 486 aaPredicted RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 LGR4Q9BXB1 951 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 MUC13Q9H3R2 512 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 AK5Q9Y6K8 562 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 C17orf113A0A1B0GUU1 675 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 PRPS2P11908 318 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 HRH2P25021 359 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 SEC13P55735 322 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 TBPL1P62380 186 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 ADAM15Q13444 863 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 WSCD2Q2TBF2 565 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 DNAJC14Q6Y2X3 702 aaPredicted RBP16.91■□□□□ 0.3
SMC6-206ENST00000446852 AMIGO2Q86SJ2 522 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 ADGRG5Q8IZF4 528 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 HM13Q8TCT9 377 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 NEIL2Q969S2 332 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 EGLN2Q96KS0 407 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 SLC25A37Q9NYZ2 338 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 PPT2Q9UMR5 302 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 TMED5Q9Y3A6 229 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 TCRBV5S2A0A599 114 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 ACADLP28330 430 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 HTR1EP28566 365 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 GALK1P51570 392 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 FOLH1Q04609 750 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 PCDH1Q08174 1060 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 CSTF3Q12996 717 aaKnown RBP16.91■□□□□ 0.3
SMC6-206ENST00000446852 DDX39BQ13838 428 aaKnown RBP16.91■□□□□ 0.3
SMC6-206ENST00000446852 CES5AQ6NT32 575 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 OR52E6Q96RD3 313 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 EFHD1Q9BUP0 239 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 IKZF5Q9H5V7 419 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 SLC6A13Q9NSD5 602 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 AURKCQ9UQB9 309 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 SH2B3Q9UQQ2 575 aa16.91■□□□□ 0.3
SMC6-206ENST00000446852 NUP214P35658 2090 aaPredicted RBP16.9■□□□□ 0.3
SMC6-206ENST00000446852 MGAT4DA6NG13 374 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 H0YIV9 168 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 K7EQS6 105 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 PCDH8O95206 1070 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 B3GALT4O96024 378 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 ZNF26P17031 533 aaPredicted RBP16.9■□□□□ 0.3
SMC6-206ENST00000446852 KIR2DL1P43626 348 aaPredicted RBP16.9■□□□□ 0.3
SMC6-206ENST00000446852 INPP5AQ14642 412 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 TBCELQ5QJ74 424 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 NOXRED1Q6NXP6 359 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 TMEM154Q6P9G4 183 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 SYTL1Q8IYJ3 562 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 GALNT4Q8N4A0 578 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 GOLM1Q8NBJ4 401 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 OR8J3Q8NGG0 315 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 EME1Q96AY2 570 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 FCRL1Q96LA6 429 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 EBPLQ9BY08 206 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 RPF2Q9H7B2 306 aaKnown RBP16.9■□□□□ 0.3
SMC6-206ENST00000446852 SPATA6Q9NWH7 488 aaPredicted RBP16.9■□□□□ 0.3
SMC6-206ENST00000446852 SLC23A2Q9UGH3 650 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 A0A1W2PP55 124 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 AP1G1O43747 822 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 SMNDC1O75940 238 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMC6-206ENST00000446852 LRATO95237 230 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 TIE1P35590 1138 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 HNF4AP41235 474 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 CDK3Q00526 305 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 MED21Q13503 144 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 RIMKLAQ8IXN7 391 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 HDDC3Q8N4P3 179 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 PPWD1Q96BP3 646 aaKnown RBP16.9■□□□□ 0.3
SMC6-206ENST00000446852 ZDHHC5Q9C0B5 715 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 OR52A5Q9H2C5 316 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 DPEP2Q9H4A9 486 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 SGK2Q9HBY8 427 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 SERHLQ9NQF3 203 aa16.9■□□□□ 0.3
SMC6-206ENST00000446852 TXNDC9O14530 226 aa16.89■□□□□ 0.29
SMC6-206ENST00000446852 AKAP10O43572 662 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms