RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MKS1Q9NXB0 559 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 WTIPA6NIX2 430 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-204ENST00000446349 NDUFS4O43181 175 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 DFNA5O60443 496 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 GSSP48637 474 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 SLC18A1P54219 525 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 ATXN1P54253 815 aaKnown RBP8.35□□□□□ -1.07
PTPN3-204ENST00000446349 ARSFP54793 590 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 CDH13P55290 713 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 FOXK1P85037 733 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 PLP2Q04941 152 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 HSPB3Q12988 150 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 CCINQ13939 588 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 LIPJQ5W064 366 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 LRRC69Q6ZNQ3 347 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 CCDC36Q8IYA8 594 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 FATE1Q969F0 183 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 CLPTM1LQ96KA5 538 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 BMFQ96LC9 184 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 METTL7AQ9H8H3 244 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 TAS2R7Q9NYW3 318 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 FLRT1Q9NZU1 646 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 FADS2O95864 444 aaKnown RBP8.35□□□□□ -1.07
PTPN3-204ENST00000446349 MPC1LP0DKB6 136 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 NMBRP28336 390 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 LBX1P52954 281 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 KLF10Q13118 480 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 TFAP2BQ92481 460 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 ZSWIM3Q96MP5 696 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 DAPK2Q9UIK4 370 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 PHF24Q9UPV7 400 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 HS3ST4Q9Y661 456 aa8.35□□□□□ -1.07
PTPN3-204ENST00000446349 EBLN1P0CF75 366 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 CTSAP10619 480 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 RPS15AP62244 130 aaKnown RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ZNF33BQ06732 778 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TMEM35AQ53FP2 167 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ALG3Q92685 438 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 KLHL25Q9H0H3 589 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 KLRF1Q9NZS2 232 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 IFT52Q9Y366 437 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ARHGEF33A8MVX0 844 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 AREL1O15033 823 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 RGS10O43665 173 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TCEA3O75764 348 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ZCCHC18P0CG32 403 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 EDNRBP24530 442 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 GBX2P52951 348 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TNFAIP8L3Q5GJ75 292 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 SIRPB2Q5JXA9 342 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 HGSNATQ68CP4 663 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 CMC1Q7Z7K0 106 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 SLC13A3Q8WWT9 602 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TM9SF4Q92544 642 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 NAA11Q9BSU3 229 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 LGR4Q9BXB1 951 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 RAB9BQ9NP90 201 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TAS2R9Q9NYW1 312 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 DKKL1Q9UK85 242 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 OGDHLQ9ULD0 1010 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 SNED1Q8TER0 1413 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 CER1O95813 267 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 UGT1A4P22310 534 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ABCG1P45844 678 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 MPP1Q00013 466 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 MEF2AQ02078 507 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 RAPSNQ13702 412 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 GRM2Q14416 872 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 HSF5Q4G112 596 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 LY6G5CQ5SRR4 150 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TXNDC8Q6A555 127 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 FUKQ8N0W3 1084 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 SPATA22Q8NHS9 363 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 SLC22A8Q8TCC7 542 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 RAB26Q9ULW5 256 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 EDARQ9UNE0 448 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 DHRS7Q9Y394 339 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 GPC6Q9Y625 555 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 HCN1O60741 890 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 PGLSO95336 258 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 APOC1P02654 83 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 MT-ND5P03915 603 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 LIPEQ05469 1076 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 AADACL2Q6P093 401 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TMIGD1Q6UXZ0 262 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 CYB5D2Q8WUJ1 264 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 NCSTNQ92542 709 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 NUMA1Q14980 2115 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 BCKDKO14874 412 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 CASKO14936 926 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 RGS20O76081 388 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 RPL10P27635 214 aaKnown RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 DNAJA1P31689 397 aaKnown RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 IL18R1Q13478 541 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 SEC23BQ15437 767 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms