RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SPNP16150 400 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 CTGFP29279 349 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 CORO1AP31146 461 aaKnown RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 HOXA9P31269 272 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 NR4A2P43354 598 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 TP53BP2Q13625 1128 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 DDX39BQ13838 428 aaKnown RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 RFLNAQ6ZTI6 216 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 HIPK1Q86Z02 1210 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 YIPF6Q96EC8 236 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 KCNC2Q96PR1 638 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 SLIRPQ9GZT3 109 aaKnown RBP13.85□□□□□ -0.19
ERCC3-203ENST00000445889 TNKS2Q9H2K2 1166 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 NECTIN3Q9NQS3 549 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 WDR70Q9NW82 654 aa13.85□□□□□ -0.19
ERCC3-203ENST00000445889 EFCAB9A8MZ26 197 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 CELF2O95319 508 aaKnown RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ALOX5P09917 674 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 EPB42P16452 691 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ITPKAP23677 461 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 CD40LGP29965 261 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 KCNA10Q16322 511 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 RTP2Q5QGT7 225 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 OR2T5Q6IEZ7 315 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 RGMBQ6NW40 437 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 CLECL1Q8IZS7 167 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 OR2T29Q8NH02 315 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 REXO5Q96IC2 774 aaKnown RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 CPPED1Q9BRF8 314 aaPredicted RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 RGS10O43665 173 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ATF6P18850 670 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ATP5C1P36542 298 aaKnown RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 GZMMP51124 257 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 FCGRTP55899 365 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 RHOAP61586 193 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 SPATC1Q76KD6 591 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 HORMAD1Q86X24 394 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 SYTL1Q8IYJ3 562 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 DNASE1L2Q92874 299 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 FUBP3Q96I24 572 aaKnown RBP eCLIP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 PSD2Q9BQI7 771 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ARHGAP39Q9C0H5 1083 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 RNF38Q9H0F5 515 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 EHD1Q9H4M9 534 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ANKMY1Q9P2S6 941 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 VPS9D1Q9Y2B5 631 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 NLRC5Q86WI3 1866 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 XIRP2A4UGR9 3374 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 PTPRDP23468 1912 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 PATJQ8NI35 1801 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 GRXCR2A6NFK2 248 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 SMAD6O43541 496 aaKnown RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 DUSP11O75319 330 aaKnown RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ABCB1P08183 1280 aaPredicted RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 HSMCR30P0CW71 290 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 TCEA1P23193 301 aaKnown RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 CLCN4P51793 760 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 HUNKP57058 714 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 RPP38P78345 283 aaKnown RBP13.84□□□□□ -0.19
ERCC3-203ENST00000445889 HSPA14Q0VDF9 509 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ACOX1Q15067 660 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ALG1LQ6GMV1 187 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ARMC8Q8IUR7 673 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 CAPSLQ8WWF8 208 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 SH3GL1Q99961 368 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 BBS2Q9BXC9 721 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ATG10Q9H0Y0 220 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 DUSP21Q9H596 190 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 IL26Q9NPH9 171 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 FBXO8Q9NRD0 319 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 KRT84Q9NSB2 600 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ARL15Q9NXU5 204 aa13.84□□□□□ -0.19
ERCC3-203ENST00000445889 ANKRD36A6QL64 1941 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 TRBV5-3A0A0A0MS03 114 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 COCHO43405 550 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 ENGP17813 658 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 SLC11A2P49281 568 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 ARHGDIAP52565 204 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 CACNG1Q06432 222 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 CHRNA6Q15825 494 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 SHQ1Q6PI26 577 aaKnown RBP13.83□□□□□ -0.2
ERCC3-203ENST00000445889 TSPAN33Q86UF1 283 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 RHOXF1Q8NHV9 184 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 PANX1Q96RD7 426 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 ROGDIQ9GZN7 287 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 DCSTAMPQ9H295 470 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 TMEM184CQ9NVA4 438 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 QPCTLQ9NXS2 382 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 TAS2R16Q9NYV7 291 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 RIMKLBQ9ULI2 386 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 GBF1Q92538 1859 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 GAPDHSO14556 408 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-203ENST00000445889 MTX2O75431 263 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 WBP4O75554 376 aaKnown RBP13.83□□□□□ -0.2
ERCC3-203ENST00000445889 STK16O75716 305 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 OPN1SWP03999 348 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 RETP07949 1114 aa13.83□□□□□ -0.2
ERCC3-203ENST00000445889 POU2F1P14859 743 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms