RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 DDHD1Q8NEL9 900 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 HERVK_113Q902F9 699 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZUFSPQ96AP4 578 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 FBXL20Q96IG2 436 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 IL17FQ96PD4 163 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 PPT2Q9UMR5 302 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 PCYT1BQ9Y5K3 369 aaPredicted RBP16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 SPINT1O43278 529 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 DENRO43583 198 aaKnown RBP16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 GMNNO75496 209 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 CPSF4O95639 269 aaKnown RBP16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 S100A3P33764 101 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 SLC6A12P48065 614 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 FOXM1Q08050 763 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 TANGO2Q6ICL3 276 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 TRIM46Q7Z4K8 759 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 MSRB3Q8IXL7 192 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 PKP4Q99569 1192 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 CARS2Q9HA77 564 aaKnown RBP16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 DYRK4Q9NR20 520 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 STOX2Q9P2F5 926 aaPredicted RBP16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 PCDHB14Q9Y5E9 798 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 GFYI3L273 518 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 NFE2L1Q14494 772 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 KIAA0040Q15053 153 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 LIN52Q52LA3 116 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 SYT12Q8IV01 421 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 TRPV3Q8NET8 790 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 FAM162AQ96A26 154 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF583Q96ND8 569 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 SAMD11Q96NU1 681 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 OR4K3Q96R72 315 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 AGPAT4Q9NRZ5 378 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 MARK1Q9P0L2 795 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 VPS4AQ9UN37 437 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 TCRBV5S2A0A599 114 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 HNRNPRO43390 633 aaKnown RBP16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 ETHE1O95571 254 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 CLPTM1O96005 669 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 SMIM18P0DKX4 95 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 EEFSECP57772 596 aaKnown RBP16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 FOXD4Q12950 439 aaPredicted RBP16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 CATSPEREQ5SY80 951 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 C9orf64Q5T6V5 341 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 RBM12BQ8IXT5 1001 aaKnown RBP16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 HS3ST5Q8IZT8 346 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 PLA2G15Q8NCC3 412 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 TSPEARQ8WU66 669 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 OR8D1Q8WZ84 308 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 NMD3Q96D46 503 aaKnown RBP16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 OTUB2Q96DC9 234 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 NUS1Q96E22 293 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 SGK2Q9HBY8 427 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 ARMC1Q9NVT9 282 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 SH2B3Q9UQQ2 575 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 NEUROG3Q9Y4Z2 214 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 U3KQV3 271 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 SOX9P48436 509 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 MAD2L1Q13257 205 aaPredicted RBP16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 FAM180BQ6P0A1 224 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 MYOCQ99972 504 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 CCM2Q9BSQ5 444 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 SMOXQ9NWM0 555 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 GULP1Q9UBP9 304 aa16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 TDRKHQ9Y2W6 561 aaKnown RBP16.31■□□□□ 0.2
LAPTM4B-201ENST00000445593 MAGEB17A8MXT2 336 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 CATP04040 527 aaKnown RBP16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 IL12RB1P42701 662 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 SLC14A1Q13336 389 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 IER5LQ5T953 404 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 TBPL2Q6SJ96 375 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 GALNT15Q8N3T1 639 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF557Q8N988 423 aaPredicted RBP16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 KXD1Q9BQD3 176 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 CLMPQ9H6B4 373 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 TM7SF3Q9NS93 570 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 ADGRE2Q9UHX3 823 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 LATO43561 262 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 PRNPP04156 253 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 PCCBP05166 539 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 ABCB1P08183 1280 aaPredicted RBP16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 ADRB3P13945 408 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 FSHRP23945 695 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 IMPA1P29218 277 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 HOXA9P31269 272 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 PLCL1Q15111 1095 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 ANKRD34AQ69YU3 496 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 KIAA0907Q7Z7F0 614 aaPredicted RBP16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF786Q8N393 782 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 DPP10Q8N608 796 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 LEMD2Q8NC56 503 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 CHFRQ96EP1 664 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 DTD2Q96FN9 168 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZNF597Q96LX8 424 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 SLC2A11Q9BYW1 496 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 YBX2Q9Y2T7 364 aaKnown RBP16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 KCNE1BA0A087WTH5 132 aa16.3■□□□□ 0.2
LAPTM4B-201ENST00000445593 GSTM1P09488 218 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms