RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 MCCC1Q96RQ3 725 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TGS1Q96RS0 853 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 INSM2Q96T92 566 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 NDNQ99608 321 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 OLFM1Q99784 485 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 NUDT22Q9BRQ3 303 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 GON7Q9BXV9 100 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 PBX4Q9BYU1 374 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ANKRD60Q9BZ19 345 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 FRMD8Q9BZ67 464 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 WNT10AQ9GZT5 417 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MIS12Q9H081 205 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TOLLIPQ9H0E2 274 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SLITRK2Q9H156 845 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MMP27Q9H306 513 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TTYH1Q9H313 450 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CRISPLD1Q9H336 500 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 OR51B6Q9H340 312 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SNX25Q9H3E2 840 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 GOLPH3LQ9H4A5 285 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TMEM231Q9H6L2 316 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ROPN1Q9HAT0 212 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 FOLH1BQ9HBA9 442 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CTPS2Q9NRF8 586 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SAMSN1Q9NSI8 373 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF446Q9NWS9 450 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 KCNK4Q9NYG8 393 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CCDC59Q9P031 241 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 IFNKQ9P0W0 207 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 RNF14Q9UBS8 474 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CYB5R1Q9UHQ9 305 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TINAGQ9UJW2 476 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 GDF2Q9UK05 429 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 NOCTQ9UK39 431 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ACSL6Q9UKU0 697 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MKLN1Q9UL63 735 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ZDHHC8Q9ULC8 765 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TBC1D24Q9ULP9 559 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ADAMTS5Q9UNA0 930 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 RPH3ALQ9UNE2 315 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 FAF1Q9UNN5 650 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 EXO1Q9UQ84 846 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 KCNK6Q9Y257 313 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 AAR2Q9Y312 384 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CDY2AQ9Y6F7 541 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CCNB3Q8WWL7 1395 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SF3B1O75533 1304 aaKnown RBP eCLIP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 XDHP47989 1333 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 A0A0J9YVX5 310 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 A0A1B0GTI1 187 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 LOC102723971A0A1B0GUV8 181 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 TMEM213A2RRL7 107 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 PRAMEF25A6NGN4 478 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 NPIPB13A6NJU9 1138 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 ERI2A8K979 691 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 WASH3PC4AMC7 463 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 NPIPB4C9JG80 1138 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SNAP23O00161 211 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 QSOX1O00391 747 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CES2O00748 559 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 FBP2O00757 339 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 TOR1AO14656 332 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SLC9A3R1O14745 358 aaPredicted RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 TERTO14746 1132 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 BCKDKO14874 412 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 EIF3HO15372 352 aaKnown RBP eCLIP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 DHX15O43143 795 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 RNMTO43148 476 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 HSPA12AO43301 675 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CTIFO43310 598 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 KDELR3O43731 214 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 KLK8O60259 260 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 FCMRO60667 390 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MSCO60682 206 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SDC3O75056 442 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MOSPD3O75425 235 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SAP30O75446 220 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GPX5O75715 221 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SASH3O75995 380 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 RSL1D1O76021 490 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 PRPF6O94906 941 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GLCEO94923 617 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 TJP3O95049 919 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 UNC5CO95185 931 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 APOL3O95236 402 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 KRT75O95678 551 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SNAP29O95721 258 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MPIG6BO95866 241 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 IFNA16P05015 189 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CSF1RP07333 972 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GNAI3P08754 354 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CD3GP09693 182 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 OR2T7P0C7T2 308 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 TMEM253P0C7T8 217 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GSTT2P0CG29 244 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GSTT2BP0CG30 244 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GIMD1P0DJR0 217 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 ITGB5P18084 799 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 LBPP18428 481 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms