RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 PPP2R2BQ00005 443 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 ABHD18Q0P651 414 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 MTAPQ13126 283 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 KCNC3Q14003 757 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 ZNF77Q15935 545 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 LY6G5CQ5SRR4 150 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 GPR180Q86V85 440 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 CLVS1Q8IUQ0 354 aaPredicted RBP17.32■□□□□ 0.36
CLDN9-201ENST00000445369 PJA1Q8NG27 643 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 NETO1Q8TDF5 533 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 CSGALNACT1Q8TDX6 532 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 MRGPRX3Q96LB0 322 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 FAM83CQ9BQN1 747 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 IFT80Q9P2H3 777 aaPredicted RBP17.32■□□□□ 0.36
CLDN9-201ENST00000445369 UGDHO60701 494 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 LRATO95237 230 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 SERPINA1P01009 418 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 CD22P20273 847 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 PMS2P3Q13401 168 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 LAPTM5Q13571 262 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 PGS1Q32NB8 556 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.31■□□□□ 0.36
CLDN9-201ENST00000445369 LIPJQ5W064 366 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 NOXRED1Q6NXP6 359 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 PNPT1Q8TCS8 783 aaKnown RBP17.31■□□□□ 0.36
CLDN9-201ENST00000445369 POP5Q969H6 163 aaKnown RBP17.31■□□□□ 0.36
CLDN9-201ENST00000445369 TCF25Q9BQ70 676 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 TOR3AQ9H497 397 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 OCEL1Q9H607 264 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 EBF1Q9UH73 591 aa17.31■□□□□ 0.36
CLDN9-201ENST00000445369 TMEM202A6NGA9 273 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 OR2AG2A6NM03 316 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 HIDE1A8MVS5 230 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ARHGEF33A8MVX0 844 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 TTC34A8MYJ7 566 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 PSIP1O75475 530 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 RFPL2O75678 378 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 FGF19O95750 216 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 CTSLP07711 333 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 TIMP2P16035 220 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ELK4P28324 431 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 YAP1P46937 504 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ERVFC1P60507 584 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ZNF33BQ06732 778 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 CSTF3Q12996 717 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 CBX2Q14781 532 aaPredicted RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ARSIQ5FYB1 569 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ZNF648Q5T619 568 aaPredicted RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 OR4F3Q6IEY1 312 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 OTOP2Q7RTS6 562 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 SLC22A15Q8IZD6 547 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ZCCHC7Q8N3Z6 543 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 RNF175Q8N4F7 328 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 CYB5D2Q8WUJ1 264 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 NELL1Q92832 810 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 TIFAQ96CG3 184 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 MBOAT4Q96T53 435 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ZSCAN5AQ9BUG6 496 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 RIOK2Q9BVS4 552 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 SMURF2Q9HAU4 748 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 RFXANKO14593 260 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 CDK4P11802 303 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 HOXB6P17509 224 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 POLR2EP19388 210 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 TTKP33981 857 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 KIR3DL1P43629 444 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 HTRA4P83105 476 aaPredicted RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 IRF8Q02556 426 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 EPS8Q12929 822 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 SLC14A1Q13336 389 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 MYBPC3Q14896 1274 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 RAB39AQ14964 217 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ARHGAP15Q53QZ3 475 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 EP400NLQ6ZTU2 488 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 KCTD8Q6ZWB6 473 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 ZNF551Q7Z340 670 aaPredicted RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 HS3ST5Q8IZT8 346 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 WDR20Q8TBZ3 569 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 SORCS1Q8WY21 1168 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 CLP1Q92989 425 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 RBM4BQ9BQ04 359 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 RBM4Q9BWF3 364 aaKnown RBP17.3■□□□□ 0.36
CLDN9-201ENST00000445369 EBPLQ9BY08 206 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 POLR1BQ9H9Y6 1135 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 TBC1D14Q9P2M4 693 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 CDC14AQ9UNH5 594 aa17.3■□□□□ 0.36
CLDN9-201ENST00000445369 QSOX1O00391 747 aa17.29■□□□□ 0.36
CLDN9-201ENST00000445369 RECQL5O94762 991 aaPredicted RBP17.29■□□□□ 0.36
CLDN9-201ENST00000445369 RHOP08100 348 aa17.29■□□□□ 0.36
CLDN9-201ENST00000445369 MYCLP1P12525 358 aaPredicted RBP17.29■□□□□ 0.36
CLDN9-201ENST00000445369 PRPS1L1P21108 318 aa17.29■□□□□ 0.36
CLDN9-201ENST00000445369 DPY19L1Q2PZI1 675 aa17.29■□□□□ 0.36
CLDN9-201ENST00000445369 TTC23Q5W5X9 447 aa17.29■□□□□ 0.36
CLDN9-201ENST00000445369 DPPA4Q7L190 304 aa17.29■□□□□ 0.36
CLDN9-201ENST00000445369 THOC6Q86W42 341 aaKnown RBP17.29■□□□□ 0.36
CLDN9-201ENST00000445369 ADHFE1Q8IWW8 467 aa17.29■□□□□ 0.36
CLDN9-201ENST00000445369 GFM2Q969S9 779 aaKnown RBP17.29■□□□□ 0.36
CLDN9-201ENST00000445369 C12orf43Q96C57 262 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms