RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 BAG1Q99933 345 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P6-201ENST00000444896 RHNO1Q9BSD3 238 aa4.13□□□□□ -1.75
HMGB3P6-201ENST00000444896 ADPRHL2Q9NX46 363 aa4.13□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZNF624Q9P2J8 865 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P6-201ENST00000444896 FANCIQ9NVI1 1328 aa4.13□□□□□ -1.75
HMGB3P6-201ENST00000444896 PIK3C2BO00750 1634 aa4.13□□□□□ -1.75
HMGB3P6-201ENST00000444896 USP32Q8NFA0 1604 aa4.13□□□□□ -1.75
HMGB3P6-201ENST00000444896 PMS2P5A8MQ11 134 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 DNM1LO00429 736 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 AMBPP02760 352 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 ACHEP22303 614 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 CA4P22748 312 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 ANOS1P23352 680 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 PPP2R1AP30153 589 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 MAPK12P53778 367 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 PRKCZQ05513 592 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 ACSM1Q08AH1 577 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 ITPRIPL2Q3MIP1 535 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 OTUD3Q5T2D3 398 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 CST9LP1Q5W188 147 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 MFSD12Q6NUT3 480 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZBTB49Q6ZSB9 765 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 MFSD6Q6ZSS7 791 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 CFAP206Q8IYR0 622 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 OR10V1Q8NGI7 309 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 SPATA3Q8NHX4 192 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZNF501Q96CX3 271 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 HDAC11Q96DB2 347 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 LRRC3BQ96PB8 259 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 FEVQ99581 238 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 NAA11Q9BSU3 229 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 ANP32EQ9BTT0 268 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 FAM129AQ9BZQ8 928 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 LAT2Q9GZY6 243 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 SDR39U1Q9NRG7 319 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 DAPK2Q9UIK4 370 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 NSD2O96028 1365 aa4.12□□□□□ -1.75
HMGB3P6-201ENST00000444896 NEXMIFQ5QGS0 1516 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 ADGRB1O14514 1584 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 REREQ9P2R6 1566 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 PREX1Q8TCU6 1659 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 LOC101059948A0A1B0GTJ6 334 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 A0A1W2PN81 502 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 PIGNO95427 931 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 ATP5BP06576 529 aaKnown RBP4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 INHBAP08476 426 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 CD48P09326 243 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 HSPA8P11142 646 aaKnown RBP4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 CD22P20273 847 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 EFNA1P20827 205 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 CHRNA7P36544 502 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 CDKN1AP38936 164 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZNF415Q09FC8 603 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 CA9Q16790 459 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 KRBOX4Q5JUW0 171 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 CEACAM20Q6UY09 585 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 CHST3Q7LGC8 479 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 NUP54Q7Z3B4 507 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 KLHDC8BQ8IXV7 354 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 MAML2Q8IZL2 1156 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 SLC4A11Q8NBS3 891 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 OR11H4Q8NGC9 324 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 SYN2Q92777 582 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 MUS81Q96NY9 551 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 CPNE1Q99829 537 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 NUP85Q9BW27 656 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 SIX2Q9NPC8 291 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZDHHC2Q9UIJ5 367 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 RIPK3Q9Y572 518 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 ARHGEF28Q8N1W1 1705 aaKnown RBP4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 EVC2Q86UK5 1308 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 NINLQ9Y2I6 1382 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZFYVE9O95405 1425 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 NSD3Q9BZ95 1437 aa4.11□□□□□ -1.75
HMGB3P6-201ENST00000444896 SIGLEC1Q9BZZ2 1709 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 PRR23AA6NEV1 266 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 FAM72CH0Y354 149 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 PRKRAO75569 313 aaKnown RBP4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 NADKO95544 446 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 NGFP01138 241 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 CFC1BP0CG36 223 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 CFC1P0CG37 223 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 JAK1P23458 1154 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 AZGP1P25311 298 aaKnown RBP4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 MT3P25713 68 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 HOXC8P31273 242 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 PTGER4P35408 488 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ANP32AP39687 249 aaKnown RBP4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZNF41P51814 821 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 CAMK2DQ13557 499 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 COG2Q14746 738 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 UGT3A2Q3SY77 523 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 XKR3Q5GH77 459 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ELFN2Q5R3F8 820 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 FAM72AQ5TYM5 149 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 GFI1BQ5VTD9 330 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ARHGAP17Q68EM7 881 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 FAM72DQ6L9T8 149 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms