RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 KLHL20Q9Y2M5 609 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 VWA7Q9Y334 891 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 ZSCAN9O15535 394 aaPredicted RBP17.9■□□□□ 0.46
CCDC188-202ENST00000444532 URI1O94763 535 aaPredicted RBP17.9■□□□□ 0.46
CCDC188-202ENST00000444532 TUBB4AP04350 444 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 SFTPCP11686 197 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 PSMB5P28074 263 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 GRIA3P42263 894 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 PNLIPRP1P54315 467 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 FASTKQ14296 549 aaKnown RBP17.9■□□□□ 0.46
CCDC188-202ENST00000444532 RHBDD2Q6NTF9 364 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 C16orf46Q6P387 395 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 PAQR3Q6TCH7 311 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 UBE2R2Q712K3 238 aaPredicted RBP17.9■□□□□ 0.46
CCDC188-202ENST00000444532 SLC26A11Q86WA9 606 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 PALM2Q8IXS6 379 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 SYTL1Q8IYJ3 562 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 EXD3Q8N9H8 876 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 MIPEPQ99797 713 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 CHST8Q9H2A9 424 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 ACTL8Q9H568 366 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 NSMCE4AQ9NXX6 385 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 SLC17A6Q9P2U8 582 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 SRPK3Q9UPE1 567 aa17.9■□□□□ 0.46
CCDC188-202ENST00000444532 SLC16A8O95907 504 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 PRB1P04280 392 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 C8GP07360 202 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 AGXTP21549 392 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 CMPK1P30085 196 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 RPA3P35244 121 aaPredicted RBP17.89■□□□□ 0.45
CCDC188-202ENST00000444532 CCR10P46092 362 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 IL2P60568 153 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 ILF2Q12905 390 aaKnown RBP17.89■□□□□ 0.45
CCDC188-202ENST00000444532 ERV3-1Q14264 604 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 WHAMMP3Q1A5X7 153 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 HECTD2Q5U5R9 776 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 FAM45BPQ6NSW5 357 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 PIWIL4Q7Z3Z4 852 aaKnown RBP17.89■□□□□ 0.45
CCDC188-202ENST00000444532 SYVN1Q86TM6 617 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 MYO1HQ8N1T3 1032 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 GPATCH11Q8N954 259 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 FAM45AQ8TCE6 357 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 MCOLN3Q8TDD5 553 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 ZNF480Q8WV37 535 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 NLNQ9BYT8 704 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 PHACTR1Q9C0D0 580 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 ADNPQ9H2P0 1102 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 SAYSD1Q9NPB0 183 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 ENAMQ9NRM1 1142 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 KALRNO60229 2985 aa17.89■□□□□ 0.45
CCDC188-202ENST00000444532 E7ENX8 843 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 SLC16A5O15375 505 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 SRPX2O60687 465 aaPredicted RBP17.88■□□□□ 0.45
CCDC188-202ENST00000444532 SYF2O95926 243 aaKnown RBP17.88■□□□□ 0.45
CCDC188-202ENST00000444532 FDXRP22570 491 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 PLTPP55058 493 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 TAP2Q03519 686 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 C19orf57Q0VDD7 668 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 SP140Q13342 867 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 PDAP1Q13442 181 aaKnown RBP17.88■□□□□ 0.45
CCDC188-202ENST00000444532 DEFB109BQ30KR1 87 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 TCTE1Q5JU00 501 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 ZNF385CQ66K41 422 aaPredicted RBP17.88■□□□□ 0.45
CCDC188-202ENST00000444532 LCN10Q6JVE6 187 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 SUSD1Q6UWL2 747 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 CYS1Q717R9 158 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 SPNS2Q8IVW8 549 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 ZNF655Q8N720 491 aaPredicted RBP17.88■□□□□ 0.45
CCDC188-202ENST00000444532 PROKR1Q8TCW9 393 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 APOBEC4Q8WW27 367 aaKnown RBP17.88■□□□□ 0.45
CCDC188-202ENST00000444532 DLG3Q92796 817 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 CCDC138Q96M89 665 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 C17orf62Q9BQA9 187 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 NDC1Q9BTX1 674 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 ACAT2Q9BWD1 397 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 PARVBQ9HBI1 364 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 TXLNGQ9NUQ3 528 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 IRAK4Q9NWZ3 460 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 ANKMY1Q9P2S6 941 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 POLHQ9Y253 713 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 PIEZO2Q9H5I5 2752 aa17.88■□□□□ 0.45
CCDC188-202ENST00000444532 C1QL1O75973 258 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 CCNDBP1O95273 360 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 CAPN1P07384 714 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 CTSBP07858 339 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 GSTA2P09210 222 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 FAM87AP0C7U9 286 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 ARSFP54793 590 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 PRDX1Q06830 199 aaKnown RBP17.87■□□□□ 0.45
CCDC188-202ENST00000444532 PTCHD3Q3KNS1 767 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 ATP1A1-AS1Q5TC04 95 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 YOD1Q5VVQ6 348 aaPredicted RBP17.87■□□□□ 0.45
CCDC188-202ENST00000444532 STRA8Q7Z7C7 330 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 ZC3HC1Q86WB0 502 aaKnown RBP17.87■□□□□ 0.45
CCDC188-202ENST00000444532 LINGO1Q96FE5 620 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 ZNF285Q96NJ3 590 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 RUFY1Q96T51 708 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 SELENOSQ9BQE4 189 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 DPH7Q9BTV6 452 aa17.87■□□□□ 0.45
CCDC188-202ENST00000444532 SEMA4CQ9C0C4 833 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms