RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ZBTB37Q5TC79 503 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 ERICH5Q6P6B1 374 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 FBXL6Q8N531 539 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 SKA2Q8WVK7 121 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 TSGA13Q96PP4 275 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 HDHD5Q9BXW7 423 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 TMEM245Q9H330 911 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 RAF1P04049 648 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 APLP1P51693 650 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 HNRNPA0Q13151 305 aaKnown RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 SNAPC1Q16533 368 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 PAMR1Q6UXH9 720 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 Q8N402 240 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 ZNF655Q8N720 491 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 FAM86B1Q8N7N1 296 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 TMEM203Q969S6 136 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 UQCC2Q9BRT2 126 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 TRIM62Q9BVG3 475 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 SLC25A51Q9H1U9 297 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 FZD8Q9H461 694 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 SAMD4AQ9UPU9 718 aaKnown RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 RTTNQ86VV8 2226 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 SLC28A1O00337 649 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 ARHGAP33O14559 1287 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 PRSS23O95084 383 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 MT-CYBP00156 380 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 HOXD8P13378 290 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 GLULP15104 373 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 FDXRP22570 491 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 NUP62P37198 522 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 DAPP51397 102 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 ZSWIM7Q19AV6 140 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 DACT2Q5SW24 774 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 CES5AQ6NT32 575 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 REM2Q8IYK8 340 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 BRINP2Q9C0B6 783 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 PCDHGB1Q9Y5G3 927 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 H3BQ06 376 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 MSCO60682 206 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 LMO2P25791 158 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 CLCN3P51790 818 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 DBPQ10586 325 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 NKG7Q16617 165 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 FAM171BQ6P995 826 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 BRAT1Q6PJG6 821 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 TMEM130Q8N3G9 435 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 FLAD1Q8NFF5 587 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 FCRL5Q96RD9 977 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 RGS17Q9UGC6 210 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 TBC1D24Q9ULP9 559 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 H3BUI4 141 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 CTRB1P17538 263 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 SLC35A2P78381 396 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 CTRB2Q6GPI1 263 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 CCDC190Q86UF4 302 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 LIX1Q8N485 282 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 DENND6BQ8NEG7 585 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 ZNF680Q8NEM1 530 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 UBXN10Q96LJ8 280 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 MBD2Q9UBB5 411 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 GALPQ9UBC7 116 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 TMCC3Q9ULS5 477 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 ABCG2Q9UNQ0 655 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 TLR6Q9Y2C9 796 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 FAM220BPB1ANY3 271 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 UPK1AO00322 258 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 MANBAO00462 879 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 FGF10O15520 208 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 MRPL19P49406 292 aaKnown RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 PIK3R6Q5UE93 754 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 APOL5Q9BWW9 433 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 TEX12Q9BXU0 123 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 SAV1Q9H4B6 383 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 MGAT4AQ9UM21 535 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 A8MX80 341 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 EGFRP00533 1210 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CYP17A1P05093 508 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 GJB1P08034 283 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 KEAP1Q14145 624 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 KCTD2Q14681 263 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 KIAA0319Q5VV43 1072 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 BBS7Q8IWZ6 715 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 NLGN4XQ8N0W4 816 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CERKQ8TCT0 537 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 RIT1Q92963 219 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ERVMER34-1Q9H9K5 563 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 LRATO95237 230 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 DDCP20711 480 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ICAM3P32942 547 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 USP39Q53GS9 565 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 TOR1AIP1Q5JTV8 583 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 TIGD3Q6B0B8 471 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 DOK6Q6PKX4 331 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CEP68Q76N32 757 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 FAM9CQ8IZT9 166 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 KCTD7Q96MP8 289 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CLSTN3Q9BQT9 956 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 RNF167Q9H6Y7 350 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ACSL5Q9ULC5 683 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SMCHD1A6NHR9 2005 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms