RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 KCNC3Q14003 757 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 NAIF1Q69YI7 327 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 CAMKK1Q8N5S9 505 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 OR4E2Q8NGC2 313 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 BTN2A2Q8WVV5 523 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 ZBED6CLQ96FA7 236 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 VMP1Q96GC9 406 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 PLEKHG4BQ96PX9 1271 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 MCCC1Q96RQ3 725 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 CCDC106Q9BWC9 280 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 OR51B5Q9H339 312 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 EBF2Q9HAK2 575 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 RIMKLBQ9ULI2 386 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 PTGDR2Q9Y5Y4 395 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 CCDC189A1A4V9 331 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 G3V2L1 256 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 NDUFS4O43181 175 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 ERI3O43414 337 aaKnown RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 KIF1CO43896 1103 aaKnown RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 SNNO75324 88 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 UGT2B17O75795 530 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 ABLIM3O94929 683 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 KLKB1P03952 638 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 CPN2P22792 545 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 TEAD4Q15561 434 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 TRIM71Q2Q1W2 868 aaKnown RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 GAREM2Q75VX8 874 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 ZNF540Q8NDQ6 660 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 OR13J1Q8NGT2 312 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 FGF13Q92913 245 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 CMTM7Q96FZ5 175 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 ARNT2Q9HBZ2 717 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 MAT2BQ9NZL9 334 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 CDH7Q9ULB5 785 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 A0A1W2PQU0 124 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 TCRBV21S2A2A0A5A6 115 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 hCG_2039718K7EN88 272 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 AXIN1O15169 862 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 GABBR2O75899 941 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 F11P03951 625 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 GBAP04062 536 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 MPC1LP0DKB6 136 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 ADRB3P13945 408 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 PTX3P26022 381 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 HOXD9P28356 352 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 SGSHP51688 502 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 PRR5P85299 388 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 TRAP1Q12931 704 aaKnown RBP8.5□□□□□ -1.05
CCDC113-202ENST00000443128 CST6Q15828 149 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 SPANXN4Q5MJ08 99 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 C6orf136Q5SQH8 315 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 BROXQ5VW32 411 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 HIPK1Q86Z02 1210 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 PIANPQ8IYJ0 282 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 SFRP1Q8N474 314 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 OR52L1Q8NGH7 329 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 OR52J3Q8NH60 311 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 RGMAQ96B86 450 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 CHID1Q9BWS9 393 aa8.5□□□□□ -1.05
CCDC113-202ENST00000443128 B3GALT2O43825 422 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 TBX10O75333 385 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 BCL10O95999 233 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 PGRP06401 933 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 HLA-FP30511 346 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 YAP1P46937 504 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 EEFSECP57772 596 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 MEF2AQ02078 507 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 MINDY4Q4G0A6 757 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 TNFAIP8L2Q6P589 184 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 DEPDC4Q8N2C3 294 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 GPR150Q8NGU9 434 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 FUBP1Q96AE4 644 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 MYRFLQ96LU7 910 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 CDCA3Q99618 268 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 A0A0J9YVX5 310 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 MID1O15344 667 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 IFNW1P05000 195 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 DHRS4L1P0CG22 281 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 CDH1P12830 882 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 IGFBP5P24593 272 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 ADRA1AP35348 466 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 ST13P50502 369 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 ZNF140P52738 457 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 ADGRE1Q14246 886 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 GRB7Q14451 532 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 USP39Q53GS9 565 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 TMEM214Q6NUQ4 689 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 DEFB119Q8N690 84 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 OR52B6Q8NGF0 335 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 SHDQ96IW2 340 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 TEFMQ96QE5 360 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 RBM4BQ9BQ04 359 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 RBM4Q9BWF3 364 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 MRPS26Q9BYN8 205 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 POLR1BQ9H9Y6 1135 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 CLK4Q9HAZ1 481 aaKnown RBP8.49□□□□□ -1.05
CCDC113-202ENST00000443128 GDE1Q9NZC3 331 aa8.49□□□□□ -1.05
CCDC113-202ENST00000443128 PCDHGB3Q9Y5G1 929 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms