RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZNF517Q6ZMY9 492 aaPredicted RBP22.73■■□□□ 1.23
VARS-217ENST00000440048 UBE2R2Q712K3 238 aaPredicted RBP22.73■■□□□ 1.23
VARS-217ENST00000440048 PALM2Q8IXS6 379 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 DSELQ8IZU8 1212 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 OR2L3Q8NG85 312 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 FBXO25Q8TCJ0 367 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 SMPDL3AQ92484 453 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 RUFY1Q96T51 708 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 PCMTD2Q9NV79 361 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 EURLQ9NYK6 297 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 PCDHGA6Q9Y5G7 932 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 FER1L5A0AVI2 2057 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 ZNF462Q96JM2 2506 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 HEATR5BQ9P2D3 2071 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 SLC16A8O95907 504 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 SYF2O95926 243 aaKnown RBP22.72■■□□□ 1.23
VARS-217ENST00000440048 KLK3P07288 261 aaPredicted RBP22.72■■□□□ 1.23
VARS-217ENST00000440048 FDXRP22570 491 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 SSTR1P30872 391 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 HSD17B2P37059 387 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 PGGT1BP53609 377 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 MC1RQ01726 317 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 CDC20Q12834 499 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 FAM45BPQ6NSW5 357 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 C8orf74Q6P047 294 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 SUSD1Q6UWL2 747 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 ZDHHC24Q6UX98 284 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 STRA8Q7Z7C7 330 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 SLC26A11Q86WA9 606 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 MCATQ8IVS2 390 aaKnown RBP22.72■■□□□ 1.23
VARS-217ENST00000440048 FAM45AQ8TCE6 357 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 ZNF480Q8WV37 535 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 DLG3Q92796 817 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 ZUFSPQ96AP4 578 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 LINGO1Q96FE5 620 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 OLFM1Q99784 485 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 LRRC1Q9BTT6 524 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 SLC7A5P2Q9GIP4 190 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 CHST8Q9H2A9 424 aa22.72■■□□□ 1.23
VARS-217ENST00000440048 TLN1Q9Y490 2541 aaKnown RBP22.71■■□□□ 1.23
VARS-217ENST00000440048 TARM1B6A8C7 271 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 TUBB4AP04350 444 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 HBQ1P09105 142 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 YBX1P67809 324 aaKnown RBP22.71■■□□□ 1.23
VARS-217ENST00000440048 PDAP1Q13442 181 aaKnown RBP22.71■■□□□ 1.23
VARS-217ENST00000440048 CRTC2Q53ET0 693 aaPredicted RBP22.71■■□□□ 1.23
VARS-217ENST00000440048 LCN10Q6JVE6 187 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 C16orf46Q6P387 395 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 ZC3HC1Q86WB0 502 aaKnown RBP22.71■■□□□ 1.23
VARS-217ENST00000440048 PPFIBP2Q8ND30 876 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 ACAT2Q9BWD1 397 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 PHACTR1Q9C0D0 580 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 SMYD2Q9NRG4 433 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 ADAMTS6Q9UKP5 1117 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 KLK4Q9Y5K2 254 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 AP1M2Q9Y6Q5 423 aa22.71■■□□□ 1.23
VARS-217ENST00000440048 ZNF839A8K0R7 811 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 PIAS1O75925 651 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 TSPAN12O95859 305 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 C8GP07360 202 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 CMPK1P30085 196 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 RPA3P35244 121 aaPredicted RBP22.7■■□□□ 1.22
VARS-217ENST00000440048 TSTA3Q13630 321 aaPredicted RBP22.7■■□□□ 1.22
VARS-217ENST00000440048 LY6DQ14210 128 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 ATP1A1-AS1Q5TC04 95 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 TLDC1Q6P9B6 456 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 SYTL1Q8IYJ3 562 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 MYO1HQ8N1T3 1032 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 ZNF655Q8N720 491 aaPredicted RBP22.7■■□□□ 1.22
VARS-217ENST00000440048 CATSPER2Q96P56 530 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 GPR87Q9BY21 358 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 ACTL8Q9H568 366 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 IRAK4Q9NWZ3 460 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 NSMCE4AQ9NXX6 385 aa22.7■■□□□ 1.22
VARS-217ENST00000440048 ESYT3A0FGR9 886 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 E7ENX8 843 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 KIF2AO00139 706 aaPredicted RBP22.69■■□□□ 1.22
VARS-217ENST00000440048 ZSCAN9O15535 394 aaPredicted RBP22.69■■□□□ 1.22
VARS-217ENST00000440048 CTSVO60911 334 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 CREG1O75629 220 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 PRB1P04280 392 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 PTPN4P29074 926 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 IL2P60568 153 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 RPS15P62841 145 aaKnown RBP22.69■■□□□ 1.22
VARS-217ENST00000440048 TAP2Q03519 686 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 PTCHD3Q3KNS1 767 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 ZC3H12BQ5HYM0 836 aaKnown RBP22.69■■□□□ 1.22
VARS-217ENST00000440048 ZNF385CQ66K41 422 aaPredicted RBP22.69■■□□□ 1.22
VARS-217ENST00000440048 CCDC25Q86WR0 208 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 MCOLN3Q8TDD5 553 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 TRIM44Q96DX7 344 aaPredicted RBP22.69■■□□□ 1.22
VARS-217ENST00000440048 SLC6A20Q9NP91 592 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 PDE10AQ9Y233 779 aa22.69■■□□□ 1.22
VARS-217ENST00000440048 FARSAQ9Y285 508 aaKnown RBP22.69■■□□□ 1.22
VARS-217ENST00000440048 BOD1L1Q8NFC6 3051 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 FAM95CA0A1B0GW59 222 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 CXorf49A8MYA2 514 aaPredicted RBP22.68■■□□□ 1.22
VARS-217ENST00000440048 SLC16A5O15375 505 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 NRP2O60462 931 aa22.68■■□□□ 1.22
VARS-217ENST00000440048 IMPA1P29218 277 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms