RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PEX16Q9Y5Y5 336 aa8.83□□□□□ -1
COPB1-202ENST00000439561 LY75O60449 1722 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ISPDA4D126 451 aa8.83□□□□□ -1
COPB1-202ENST00000439561 M0QX08 132 aa8.83□□□□□ -1
COPB1-202ENST00000439561 CLIC1O00299 241 aa8.83□□□□□ -1
COPB1-202ENST00000439561 SSX4O60224 188 aa8.83□□□□□ -1
COPB1-202ENST00000439561 BCKDHAP12694 445 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ENGP17813 658 aa8.83□□□□□ -1
COPB1-202ENST00000439561 FPR1P21462 350 aa8.83□□□□□ -1
COPB1-202ENST00000439561 PRIM2P49643 509 aa8.83□□□□□ -1
COPB1-202ENST00000439561 MVKQ03426 396 aa8.83□□□□□ -1
COPB1-202ENST00000439561 TAF10Q12962 218 aa8.83□□□□□ -1
COPB1-202ENST00000439561 NPRL3Q12980 569 aa8.83□□□□□ -1
COPB1-202ENST00000439561 IL18R1Q13478 541 aa8.83□□□□□ -1
COPB1-202ENST00000439561 BOP1Q14137 746 aaKnown RBP8.83□□□□□ -1
COPB1-202ENST00000439561 MAD2L1BPQ15013 274 aaPredicted RBP8.83□□□□□ -1
COPB1-202ENST00000439561 SLC14A2Q15849 920 aa8.83□□□□□ -1
COPB1-202ENST00000439561 BCL7AQ4VC05 210 aa8.83□□□□□ -1
COPB1-202ENST00000439561 XKR7Q5GH72 579 aa8.83□□□□□ -1
COPB1-202ENST00000439561 CPZQ66K79 652 aa8.83□□□□□ -1
COPB1-202ENST00000439561 DPP10Q8N608 796 aa8.83□□□□□ -1
COPB1-202ENST00000439561 OR9Q1Q8NGQ5 310 aa8.83□□□□□ -1
COPB1-202ENST00000439561 OMA1Q96E52 524 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ASIC4Q96FT7 647 aa8.83□□□□□ -1
COPB1-202ENST00000439561 PHOX2BQ99453 314 aa8.83□□□□□ -1
COPB1-202ENST00000439561 GORASP2Q9H8Y8 452 aa8.83□□□□□ -1
COPB1-202ENST00000439561 RAD18Q9NS91 495 aa8.83□□□□□ -1
COPB1-202ENST00000439561 MALT1Q9UDY8 824 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ZNF639Q9UID6 485 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ARIH1Q9Y4X5 557 aaPredicted RBP8.83□□□□□ -1
COPB1-202ENST00000439561 WDR81Q562E7 1941 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.82□□□□□ -1
COPB1-202ENST00000439561 CCDC182A6NF36 153 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TNFRSF11BO00300 401 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SUV39H1O43463 412 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TNFRSF21O75509 655 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SNX4O95219 450 aa8.82□□□□□ -1
COPB1-202ENST00000439561 MMP2P08253 660 aa8.82□□□□□ -1
COPB1-202ENST00000439561 PCMT1P22061 227 aa8.82□□□□□ -1
COPB1-202ENST00000439561 RYKP34925 604 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SOAT1P35610 550 aa8.82□□□□□ -1
COPB1-202ENST00000439561 OR1E2P47887 323 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SLC35A2P78381 396 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ZNF177Q13360 481 aaPredicted RBP8.82□□□□□ -1
COPB1-202ENST00000439561 GNASQ5JWF2 1037 aa8.82□□□□□ -1
COPB1-202ENST00000439561 FAM131AQ6UXB0 335 aa8.82□□□□□ -1
COPB1-202ENST00000439561 UMODL1-AS1Q8N2C9 162 aa8.82□□□□□ -1
COPB1-202ENST00000439561 GPR156Q8NFN8 814 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ENKURQ8TC29 256 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SUN5Q8TC36 379 aa8.82□□□□□ -1
COPB1-202ENST00000439561 DNASE1L2Q92874 299 aa8.82□□□□□ -1
COPB1-202ENST00000439561 EGLN2Q96KS0 407 aa8.82□□□□□ -1
COPB1-202ENST00000439561 BTN2A3PQ96KV6 586 aa8.82□□□□□ -1
COPB1-202ENST00000439561 VPS35Q96QK1 796 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SMAD5Q99717 465 aaKnown RBP8.82□□□□□ -1
COPB1-202ENST00000439561 SLIRPQ9GZT3 109 aaKnown RBP8.82□□□□□ -1
COPB1-202ENST00000439561 HOXD1Q9GZZ0 328 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SP140LQ9H930 580 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TAS2R9Q9NYW1 312 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SLC25A37Q9NYZ2 338 aa8.82□□□□□ -1
COPB1-202ENST00000439561 GPRC5BQ9NZH0 403 aa8.82□□□□□ -1
COPB1-202ENST00000439561 GNG14A0A1W2PPG7 69 aa8.82□□□□□ -1
COPB1-202ENST00000439561 IFRD1O00458 451 aaPredicted RBP8.82□□□□□ -1
COPB1-202ENST00000439561 ALPIP09923 528 aa8.82□□□□□ -1
COPB1-202ENST00000439561 CD52P31358 61 aa8.82□□□□□ -1
COPB1-202ENST00000439561 IL12RB1P42701 662 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TUFMP49411 452 aaKnown RBP8.82□□□□□ -1
COPB1-202ENST00000439561 KCNQ1P51787 676 aa8.82□□□□□ -1
COPB1-202ENST00000439561 RHOAP61586 193 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ST3GAL4Q11206 333 aa8.82□□□□□ -1
COPB1-202ENST00000439561 IHHQ14623 411 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ARMC12Q5T9G4 340 aa8.82□□□□□ -1
COPB1-202ENST00000439561 PRSS48Q7RTY5 328 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SLC34A3Q8N130 599 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ST13P5Q8NFI4 369 aaPredicted RBP8.82□□□□□ -1
COPB1-202ENST00000439561 CD200R1Q8TD46 325 aa8.82□□□□□ -1
COPB1-202ENST00000439561 NELL1Q92832 810 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ZNF300Q96RE9 604 aaPredicted RBP8.82□□□□□ -1
COPB1-202ENST00000439561 IL4I1Q96RQ9 567 aa8.82□□□□□ -1
COPB1-202ENST00000439561 CENPOQ9BU64 300 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ATG10Q9H0Y0 220 aa8.82□□□□□ -1
COPB1-202ENST00000439561 FBXO8Q9NRD0 319 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SLC6A13Q9NSD5 602 aa8.82□□□□□ -1
COPB1-202ENST00000439561 CCL15-CCL14A0A0B4J2E2 113 aa8.82□□□□□ -1
COPB1-202ENST00000439561 H3BN98 237 aa8.82□□□□□ -1
COPB1-202ENST00000439561 INSIG1O15503 277 aa8.82□□□□□ -1
COPB1-202ENST00000439561 KIAA0513O60268 411 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ERN1O75460 977 aaKnown RBP8.82□□□□□ -1
COPB1-202ENST00000439561 STK16O75716 305 aa8.82□□□□□ -1
COPB1-202ENST00000439561 RGRP47804 291 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TUBA1BP68363 451 aa8.82□□□□□ -1
COPB1-202ENST00000439561 VLDLRP98155 873 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SERINC3Q13530 473 aa8.82□□□□□ -1
COPB1-202ENST00000439561 CCL15Q16663 113 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TYSND1Q2T9J0 566 aa8.82□□□□□ -1
COPB1-202ENST00000439561 SHQ1Q6PI26 577 aaKnown RBP8.82□□□□□ -1
COPB1-202ENST00000439561 TMPRSS11AQ6ZMR5 421 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TUBA1AQ71U36 451 aa8.82□□□□□ -1
COPB1-202ENST00000439561 NRARPQ7Z6K4 114 aa8.82□□□□□ -1
COPB1-202ENST00000439561 DENND1CQ8IV53 801 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms