RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 AAK1Q2M2I8 961 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CCDC58Q4VC31 144 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 FAM171A1Q5VUB5 890 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CAPN13Q6MZZ7 669 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 ZNF544Q6NX49 715 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 SYCE2Q6PIF2 218 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CYP4Z1Q86W10 505 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CLIP3Q96DZ5 547 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 TBATAQ96M53 351 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 TBCDQ9BTW9 1192 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 ACTL8Q9H568 366 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 UBE2ZQ9H832 354 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 POPDC3Q9HBV1 291 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 HEBP1Q9NRV9 189 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NDFIP2Q9NV92 336 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 CDH9Q9ULB4 789 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CARD8Q9Y2G2 431 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CAB39Q9Y376 341 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 HSPE1-MOB4S4R3N1 261 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NUP210Q8TEM1 1887 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 ELOVL7A1L3X0 281 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NCF1BA6NI72 391 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 PDZK1P1A8MUH7 402 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NCF1CA8MVU1 366 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 IFRD1O00458 451 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 ZW10O43264 779 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 AIREO43918 545 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 ALX3O95076 343 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 APOA1P02647 267 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NCF1P14598 390 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 HOXB8P17481 243 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 S100A5P33763 92 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 OR2B6P58173 313 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 DEFA1P59665 94 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 DEFA3P59666 94 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 PON2Q15165 354 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 SYT16Q17RD7 645 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 WSCD1Q658N2 575 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CYP20A1Q6UW02 462 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 Q6ZSR9 355 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 TOP6BLQ8N6T0 577 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NCLNQ969V3 563 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 PKMYT1Q99640 499 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 TTPALQ9BTX7 342 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 REXO4Q9GZR2 422 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 VNN3Q9NY84 501 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 PCTPQ9UKL6 214 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 PCDHB8Q9UN66 801 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 ANGPTL3Q9Y5C1 460 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 GMPPBQ9Y5P6 360 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 MYO16Q9Y6X6 1858 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 EVPLLA8MZ36 301 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CD3EAPO15446 510 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 MRPS14O60783 128 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 MLYCDO95822 493 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 ITGB6P18564 788 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CD86P42081 329 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 ITKQ08881 620 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 KEAP1Q14145 624 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 TSNQ15631 228 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 GPRIN3Q6ZVF9 776 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 DET1Q7L5Y6 550 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 BHLHA9Q7RTU4 235 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CHPFQ8IZ52 775 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NLGN4XQ8N0W4 816 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CDYL2Q8N8U2 506 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 ZMIZ2Q8NF64 920 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 PDLIM5Q96HC4 596 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 ITPAQ9BY32 194 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 IKZF5Q9H5V7 419 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 MAGIXQ9H6Y5 334 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CRTAC1Q9NQ79 661 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 TMEM30AQ9NV96 361 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 FBXL12Q9NXK8 326 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 GALPQ9UBC7 116 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 A3GALT2U3KPV4 340 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 OR4F21O95013 312 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CCR1P32246 355 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 LIPAP38571 399 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 KCNQ1P51787 676 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 SEMA3AQ14563 771 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CDK10Q15131 360 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 RAB41Q5JT25 222 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 SHQ1Q6PI26 577 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 GATAD2AQ86YP4 633 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 AMER2Q8N7J2 671 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 DCBLD1Q8N8Z6 715 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 OR56A4Q8NGH8 313 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 OR52E4Q8NGH9 312 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 IMP4Q96G21 291 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 CDCA3Q99618 268 aaPredicted RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 APOL4Q9BPW4 351 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 AARSD1Q9BTE6 412 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 DERL2Q9GZP9 239 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NXF2Q9GZY0 626 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 CATSPERBQ9H7T0 1116 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 NT5MQ9NPB1 228 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 DCAF13Q9NV06 445 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 ADPRHL2Q9NX46 363 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms