RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PPP1R32Q7Z5V6 425 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 RBMXL3Q8N7X1 1067 aaKnown RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 CLEC18CQ8NCF0 446 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 OR2L3Q8NG85 312 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 HMGCLL1Q8TB92 370 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 PCSK5Q92824 1860 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 MAGOHBQ96A72 148 aaKnown RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 SLC29A3Q9BZD2 475 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 CCDC68Q9H2F9 335 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 WDR54Q9H977 334 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 ATP13A2Q9NQ11 1180 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 FAM114A2Q9NRY5 505 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 IL1RAPL1Q9NZN1 696 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 DOPEY2Q9Y3R5 2298 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 A0A0J9YVX5 310 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 KRT87PA6NCN2 255 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 AGPSO00116 658 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 PRICKLE3O43900 615 aaPredicted RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 ALBP02768 609 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 EIF2S1P05198 315 aaKnown RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 PKMP14618 531 aaKnown RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 RPA3P35244 121 aaPredicted RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 CCZ1BP86790 482 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 CCZ1P86791 482 aaPredicted RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 TSTA3Q13630 321 aaPredicted RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 DHX34Q14147 1143 aaKnown RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 TTLL9Q3SXZ7 439 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 ANKRD20A4Q4UJ75 823 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 WASHC2DQ5SRD0 308 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 FHL5Q5TD97 284 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 IRAK1BP1Q5VVH5 260 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 ZNF470Q6ECI4 717 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 CILP2Q8IUL8 1156 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 METTL27Q8N6F8 245 aaPredicted RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 OR9A1PQ8NGU1 263 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 NACC2Q96BF6 587 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 ZNF669Q96BR6 464 aaPredicted RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 VPS50Q96JG6 964 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 PBKQ96KB5 322 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 NAP1L3Q99457 506 aaPredicted RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 ACAT2Q9BWD1 397 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 XAB2Q9HCS7 855 aaKnown RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 SLC22A11Q9NSA0 550 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 INTS10Q9NVR2 710 aaKnown RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 NXT1Q9UKK6 140 aaKnown RBP17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 JRKLQ9Y4A0 524 aa17.67■□□□□ 0.42
AC004540.1-201ENST00000439120 MAGEB16A2A368 324 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 SDR42E2A6NKP2 422 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 GOLGA8MH3BSY2 632 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 CTSVO60911 334 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 USP1O94782 785 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 AGFG2O95081 481 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 MATN4O95460 622 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 CATP04040 527 aaKnown RBP17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 MMP11P24347 488 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 ITGA3P26006 1051 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 MAGEA6P43360 314 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 GCGRP47871 477 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 SRSF1Q07955 248 aaKnown RBP eCLIP17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 AIMP2Q13155 320 aaKnown RBP17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 NKG7Q16617 165 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 KLHL38Q2WGJ6 581 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 PRR30Q53SZ7 412 aaPredicted RBP17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 ACSBG2Q5FVE4 666 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 ANKRD22Q5VYY1 191 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 IQCKQ8N0W5 287 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 OR2A1Q8NGT9 310 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 ILKAPQ9H0C8 392 aaPredicted RBP17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 SOX17Q9H6I2 414 aaPredicted RBP17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 LRRC4CQ9HCJ2 640 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 ZC3H7BQ9UGR2 993 aaKnown RBP17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 B3GNT3Q9Y2A9 372 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 PTPN13Q12923 2485 aa17.66■□□□□ 0.42
AC004540.1-201ENST00000439120 NUP210LQ5VU65 1888 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 FAM237BA0A1B0GVD1 139 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 HYKKA2RU49 373 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 FITM1A5D6W6 292 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 ZNF839A8K0R7 811 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 CYSRT1A8MQ03 144 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 VPS26AO75436 327 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 MLNP12872 115 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 ITGAXP20702 1163 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 OR1D4P47884 311 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 FASTKQ14296 549 aaKnown RBP17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 GBX1Q14549 363 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 RBBP7Q16576 425 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 FRMPD2BQ6IN97 320 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 TTC27Q6P3X3 843 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 CCDC137Q6PK04 289 aaKnown RBP17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 SHISA6Q6ZSJ9 500 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 CENPUQ71F23 418 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 CAND1Q86VP6 1230 aaKnown RBP17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 ZADH2Q8N4Q0 377 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 Q8NA96 180 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 SMPDL3AQ92484 453 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 MS4A14Q96JA4 679 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 ZNF285Q96NJ3 590 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 ZFYVE21Q9BQ24 234 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 DPH7Q9BTV6 452 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms