RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 RAB41Q5JT25 222 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 UBXN11Q5T124 520 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 PRSS48Q7RTY5 328 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 UBQLNLQ8IYU4 475 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 TOP6BLQ8N6T0 577 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 MAL2Q969L2 176 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 PGAP3Q96FM1 320 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-204ENST00000438964 ARPC5LQ9BPX5 153 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 EBPLQ9BY08 206 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 DERL2Q9GZP9 239 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 SYTL2Q9HCH5 934 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 RLIMQ9NVW2 624 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 C1orf109Q9NX04 203 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 PRELID1Q9Y255 219 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 DERAQ9Y315 318 aa13.05□□□□□ -0.32
ACTN1-204ENST00000438964 POLR2AP24928 1970 aaKnown RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 CCDC88CQ9P219 2028 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 A0A0D9SEW6 157 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 C12orf71A8MTZ7 269 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 A8MX80 341 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 GABRDO14764 452 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 EIF2S1P05198 315 aaKnown RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 NUDT7P0C024 238 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 DARSP14868 501 aaKnown RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 RGRP47804 291 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 ARHGDIAP52565 204 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 CCL23P55773 120 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 EFEMP1Q12805 493 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 GTF2H2Q13888 395 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 KIAA0040Q15053 153 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 LRRC66Q68CR7 880 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 ZNF544Q6NX49 715 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 TAPT1Q6NXT6 567 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 GTF2H2CQ6P1K8 395 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 LAX1Q8IWV1 398 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 CLDN19Q8N6F1 224 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 OR8J3Q8NGG0 315 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 TSPEARQ8WU66 669 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 JPH3Q8WXH2 748 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 MAP6Q96JE9 813 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 SPON2Q9BUD6 331 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 MAT2BQ9NZL9 334 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 ANGPTL3Q9Y5C1 460 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 PCDHGC4Q9Y5F7 938 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 DNAH14Q0VDD8 3507 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 SAGE2PA6NJ88 616 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 PDHXO00330 501 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 B3GAT3O94766 335 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 ALX3O95076 343 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 NTRK1P04629 796 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 CTSHP09668 335 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 JUNDP17535 347 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 OR1E2P47887 323 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 RFX2P48378 723 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 RAB25P57735 213 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 SEMG2Q02383 582 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 UBE3AQ05086 875 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 NPRL3Q12980 569 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 CAMK2GQ13555 558 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 ZNF235Q14590 738 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 TSTQ16762 297 aaKnown RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 KIAA1614Q5VZ46 1190 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 CAPN13Q6MZZ7 669 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 SHQ1Q6PI26 577 aaKnown RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 KLHL17Q6TDP4 642 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 GPR149Q86SP6 731 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 STX19Q8N4C7 294 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 NATD1Q8N6N6 113 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 OR5H6Q8NGV6 325 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 ATP13A1Q9HD20 1204 aa13.04□□□□□ -0.32
ACTN1-204ENST00000438964 CCDC177Q9NQR7 707 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 THUMPD1Q9NXG2 353 aaKnown RBP13.04□□□□□ -0.32
ACTN1-204ENST00000438964 MEIOCA2RUB1 952 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 OR6C70A6NIJ9 312 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 RFXAPO00287 272 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 LRRTM2O43300 516 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 TNFSF8P32971 234 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 P2RX3P56373 397 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 IL2P60568 153 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 SIGIRRQ6IA17 410 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 GLT6D1Q7Z4J2 308 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 DTX3Q8N9I9 347 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 GGHQ92820 318 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 PDLIM5Q96HC4 596 aaKnown RBP13.03□□□□□ -0.32
ACTN1-204ENST00000438964 OR2A14Q96R47 310 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 MROH8Q9H579 483 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 ARNT2Q9HBZ2 717 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 MALT1Q9UDY8 824 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 KCNH4Q9UQ05 1017 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 UNCXA6NJT0 531 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 CPSF4O95639 269 aaKnown RBP13.03□□□□□ -0.32
ACTN1-204ENST00000438964 RPLP0P05388 317 aaKnown RBP13.03□□□□□ -0.32
ACTN1-204ENST00000438964 CKMT1AP12532 417 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 SOX3P41225 446 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms