RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 TMED2Q15363 201 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 PCID2Q5JVF3 399 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 PRAMEF13Q5VWM6 474 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 KIRREL2Q6UWL6 708 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 CCDC89Q8N998 374 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 PEX13Q92968 403 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 SLC22A18Q96BI1 424 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 SYBUQ9NX95 663 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 ANAPC5Q9UJX4 755 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 TTC7AQ9ULT0 858 aaPredicted RBP17.38■□□□□ 0.37
GTF3A-204ENST00000438571 GUCA1BQ9UMX6 200 aa17.38■□□□□ 0.37
GTF3A-204ENST00000438571 NOVA2Q9UNW9 492 aaKnown RBP17.38■□□□□ 0.37
GTF3A-204ENST00000438571 NOTCH2Q04721 2471 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 LOC105369274A0A096LPK9 316 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 LOC102723532A0A0G2JNH3 316 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 A0A0J9YVX5 310 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 TCRBV7S3A2A0A539 114 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 F8W8V4 182 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 NIPSNAP2O75323 286 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 IGHEP01854 428 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 MGAT1P26572 445 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 BASP1P80723 227 aaKnown RBP17.37■□□□□ 0.37
GTF3A-204ENST00000438571 GRM7Q14831 915 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 AARS2Q5JTZ9 985 aaKnown RBP17.37■□□□□ 0.37
GTF3A-204ENST00000438571 NLRP9Q7RTR0 991 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 PARP9Q8IXQ6 854 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 PRSS58Q8IYP2 241 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 OR4N4Q8N0Y3 316 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 ZADH2Q8N4Q0 377 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 AMER2Q8N7J2 671 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 TTC29Q8NA56 475 aaPredicted RBP17.37■□□□□ 0.37
GTF3A-204ENST00000438571 SKA2Q8WVK7 121 aaPredicted RBP17.37■□□□□ 0.37
GTF3A-204ENST00000438571 MFSD3Q96ES6 412 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 WDR77Q9BQA1 342 aaPredicted RBP17.37■□□□□ 0.37
GTF3A-204ENST00000438571 FRMD8P1Q9BZ68 369 aaPredicted RBP17.37■□□□□ 0.37
GTF3A-204ENST00000438571 SLC26A1Q9H2B4 701 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 INTS7Q9NVH2 962 aaKnown RBP17.37■□□□□ 0.37
GTF3A-204ENST00000438571 GALPQ9UBC7 116 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 GNPTGQ9UJJ9 305 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 COPG1Q9Y678 874 aaKnown RBP17.37■□□□□ 0.37
GTF3A-204ENST00000438571 CRYBG3Q68DQ2 2970 aa17.37■□□□□ 0.37
GTF3A-204ENST00000438571 FITM1A5D6W6 292 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 ANKUB1A6NFN9 424 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 WIPF3A6NGB9 483 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 FFAR3O14843 346 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 GPR42O15529 346 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 IPO13O94829 963 aaKnown RBP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 ALBP02768 609 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 RPS3P23396 243 aaKnown RBP eCLIP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 VARSP26640 1264 aaKnown RBP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 KCNJ1P48048 391 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 TTPAP49638 278 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 TERF1P54274 439 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 ZC3H12BQ5HYM0 836 aaKnown RBP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 WASHC2DQ5SRD0 308 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 RNF10Q8N5U6 811 aaKnown RBP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 OR2L3Q8NG85 312 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 OR2A1Q8NGT9 310 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 RAD51AP1Q96B01 352 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 C10orf90Q96M02 699 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 BIRC8Q96P09 236 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 PANX3Q96QZ0 392 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 BARD1Q99728 777 aaKnown RBP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 TRIM56Q9BRZ2 755 aaKnown RBP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 WDR54Q9H977 334 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 EIF2B3Q9NR50 452 aaKnown RBP17.36■□□□□ 0.37
GTF3A-204ENST00000438571 ENAMQ9NRM1 1142 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 MYO7BQ6PIF6 2116 aa17.36■□□□□ 0.37
GTF3A-204ENST00000438571 ITPR2Q14571 2701 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 VSTM2BA6NLU5 285 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 E2F3O00716 465 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 NDUFS3O75489 264 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 DDAH2O95865 285 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 PPARGP37231 505 aaPredicted RBP17.35■□□□□ 0.37
GTF3A-204ENST00000438571 RBBP7Q16576 425 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 TUBB8Q3ZCM7 444 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 TCTE1Q5JU00 501 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 MEI1Q5TIA1 1274 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 IGFL2Q6UWQ7 119 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 RNF44Q7L0R7 432 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 OTOAQ7RTW8 1153 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 MAMDC2Q7Z304 686 aaPredicted RBP17.35■□□□□ 0.37
GTF3A-204ENST00000438571 TXLNBQ8N3L3 684 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 OTUD6BQ8N6M0 293 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 OR11G2Q8NGC1 345 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 PPP4R1Q8TF05 950 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 UBE2Q2Q8WVN8 375 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 TM9SF4Q92544 642 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 C8orf44Q96CB5 159 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 ACAT2Q9BWD1 397 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 RAB11FIP5Q9BXF6 653 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 IL1RAPL1Q9NZN1 696 aa17.35■□□□□ 0.37
GTF3A-204ENST00000438571 ZC3H7BQ9UGR2 993 aaKnown RBP17.35■□□□□ 0.37
GTF3A-204ENST00000438571 HYKKA2RU49 373 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 EIF2S1P05198 315 aaKnown RBP17.34■□□□□ 0.37
GTF3A-204ENST00000438571 FMO4P31512 558 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 DCTP40126 519 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 KLC1Q07866 573 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 GBX1Q14549 363 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms