RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 PLAGL1Q9UM63 463 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 MRFAP1Q9Y605 127 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 DUSP10Q9Y6W6 482 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 SEC16AO15027 2179 aa7.46□□□□□ -1.21
VPS50-204ENST00000438395 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 ANKUB1A6NFN9 424 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 MROH6A6NGR9 719 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 OR51F1A6NGY5 319 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 TCP11X1B4DZS4 312 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 PFDN6O15212 129 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 KRT86O43790 486 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 SEMA7AO75326 666 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 KLF7O75840 302 aaPredicted RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 METTL18O95568 372 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 GOT2P00505 430 aaKnown RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 ERVK-10P10266 1014 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 MAGP20916 626 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 ACADLP28330 430 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 PKLRP30613 574 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 STIP1P31948 543 aaKnown RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 FOXN2P32314 431 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 TTPAP49638 278 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 PER3P56645 1201 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 AIMP2Q13155 320 aaKnown RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 GRM7Q14831 915 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 NAA25Q14CX7 972 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 SF1Q15637 639 aaKnown RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 ZIC1Q15915 447 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 RBBP7Q16576 425 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 ZNF658BQ4V348 819 aaPredicted RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 TCTE1Q5JU00 501 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 AGAP7PQ5VUJ5 663 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 KCTD11Q693B1 232 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 UNC5DQ6UXZ4 953 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 NAPRTQ6XQN6 538 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 TTLL10Q6ZVT0 673 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 MAMDC2Q7Z304 686 aaPredicted RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 MCATQ8IVS2 390 aaKnown RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 SLC22A15Q8IZD6 547 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 CISD2Q8N5K1 135 aaKnown RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 RBMXL3Q8N7X1 1067 aaKnown RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 LRRC57Q8N9N7 239 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 ACRBPQ8NEB7 543 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 OR52K1Q8NGK4 314 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 SLC35B2Q8TB61 432 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 COG1Q8WTW3 980 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 ATG4AQ8WYN0 398 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 HDAC10Q969S8 669 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 NACC2Q96BF6 587 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 C5orf34Q96MH7 638 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 FOPNLQ96NB1 174 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 AGAP4Q96P64 663 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 NRTNQ99748 197 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 WDR77Q9BQA1 342 aaPredicted RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 FRMD8P1Q9BZ68 369 aaPredicted RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 EPS8L2Q9H6S3 715 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 FBXL4Q9UKA2 621 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 ZNF148Q9UQR1 794 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 COPG1Q9Y678 874 aaKnown RBP7.46□□□□□ -1.22
VPS50-204ENST00000438395 PRSS21Q9Y6M0 314 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 HIVEP3Q5T1R4 2406 aa7.46□□□□□ -1.22
VPS50-204ENST00000438395 ABCA12Q86UK0 2595 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 SLC5A10A0PJK1 596 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 AGPSO00116 658 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 PRMT5O14744 637 aaPredicted RBP7.45□□□□□ -1.22
VPS50-204ENST00000438395 KPNA5O15131 536 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 OR1I1O60431 355 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 NDUFS3O75489 264 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 FKBP9O95302 570 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 APRTP07741 180 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 CD9P21926 228 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 MMP11P24347 488 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 ADRA1DP25100 572 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 GLRBP48167 497 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 ZNF75DP51815 510 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 OCA2Q04671 838 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 MSLNQ13421 630 aaPredicted RBP7.45□□□□□ -1.22
VPS50-204ENST00000438395 TSTD2Q5T7W7 516 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 YOD1Q5VVQ6 348 aaPredicted RBP7.45□□□□□ -1.22
VPS50-204ENST00000438395 OTOAQ7RTW8 1153 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 PPP1R32Q7Z5V6 425 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 KLHDC8BQ8IXV7 354 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 ALDH16A1Q8IZ83 802 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 C2orf73Q8N5S3 287 aaPredicted RBP7.45□□□□□ -1.22
VPS50-204ENST00000438395 Q8NA96 180 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 OR4L1Q8NH43 312 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 SNRNP40Q96DI7 357 aaKnown RBP7.45□□□□□ -1.22
VPS50-204ENST00000438395 CNDP1Q96KN2 507 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 PANX3Q96QZ0 392 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 BAG1Q99933 345 aaPredicted RBP7.45□□□□□ -1.22
VPS50-204ENST00000438395 SELENOSQ9BQE4 189 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 LACRTQ9GZZ8 138 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 WDR54Q9H977 334 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 BRD7Q9NPI1 651 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 CUTCQ9NTM9 273 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 CATSPERZQ9NTU4 200 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 ASF1BQ9NVP2 202 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 IL1RAPL1Q9NZN1 696 aa7.45□□□□□ -1.22
VPS50-204ENST00000438395 CIDEBQ9UHD4 219 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms