RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 MANBAO00462 879 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 STX16O14662 325 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ARHGEF15O94989 841 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 SIM2Q14190 667 aaPredicted RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 CCDC92Q53HC0 331 aaPredicted RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ALG1LQ6GMV1 187 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 RAET1GQ6H3X3 334 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM126BQ8IUX1 230 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 SYT12Q8IV01 421 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 TNIP2Q8NFZ5 429 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 HM13Q8TCT9 377 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ROPN1LQ96C74 230 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 LRRC3BQ96PB8 259 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 CARS2Q9HA77 564 aaKnown RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ARID1BQ8NFD5 2236 aaPredicted RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 A8MU76 341 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 GRM6O15303 877 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 SH3BP5O60239 455 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 CST1P01037 141 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 CXCL10P02778 98 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 CCNA2P20248 432 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 RAD23AP54725 363 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 FNDC3BQ53EP0 1204 aaKnown RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 C6orf183Q5T699 404 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ABRAXAS1Q6UWZ7 409 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ERMP1Q7Z2K6 904 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 PIWIL3Q7Z3Z3 882 aaKnown RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 CYP2U1Q7Z449 544 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 C12orf40Q86WS4 652 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 FIBINQ8TAL6 211 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 MAL2Q969L2 176 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 OSGEPL1Q9H4B0 414 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 TMPRSS11EQ9UL52 423 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 OGDHLQ9ULD0 1010 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 SPTBP11277 2137 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 TCRBV3S1A0A5B6 114 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 POP4O95707 220 aaKnown RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 KRT6AP02538 564 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 KRT6BP04259 564 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 TCF3P15923 654 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 CEBPBP17676 345 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 HRH2P25021 359 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 KRT6CP48668 564 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 GALNT1Q10472 559 aaPredicted RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ZNF284Q2VY69 593 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ZNF829Q3KNS6 432 aaPredicted RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ADCK2Q7Z695 626 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 MMAAQ8IVH4 418 aaKnown RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 RAVER1Q8IY67 606 aaKnown RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 OR4K1Q8NGD4 311 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 OR5AK3PQ8NH89 298 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 TBC1D15Q8TC07 691 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ZDHHC3Q9NYG2 299 aa15.15■□□□□ 0.02
SCARF1-203ENST00000434376 ASCC3Q8N3C0 2202 aaKnown RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 TRIOBPQ9H2D6 2365 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 FAM234BA2RU67 622 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 TBC1D3BA6NDS4 549 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 ADAM23O75077 832 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 TGFB1P01137 390 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 ALBP02768 609 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 SPINT3P49223 89 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 HKDC1Q2TB90 917 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 C1QTNF12Q5T7M4 302 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 SPATA19Q7Z5L4 167 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PLD3Q8IV08 490 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 HID1Q8IV36 788 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 MCOLN3Q8TDD5 553 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 HPS1Q92902 700 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 TMBIM1Q969X1 311 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PANX1Q96RD7 426 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PRDM8Q9NQV8 689 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 SPHK2Q9NRA0 654 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PCDHA9Q9Y5H5 950 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 E7EQ34 232 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 SLC22A2O15244 555 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 BMP10O95393 424 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 SLC16A8O95907 504 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 C8BP07358 591 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 CTSAP10619 480 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 ATP1B2P14415 290 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-203ENST00000434376 ST8SIA6P61647 398 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 C5orf22Q49AR2 442 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 TMEM53Q6P2H8 277 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 Q6ZNB5 142 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 C11orf74Q86VG3 221 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 TMC8Q8IU68 726 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 KCTD5Q9NXV2 234 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 ACTR3BQ9P1U1 418 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 SPASTQ9UBP0 616 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 RAPGEFL1Q9UHV5 662 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 ABHD14A-ACY1A0A1B0GW23 586 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PRAMEF4O60810 478 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 MAGP20916 626 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 CLCN4P51793 760 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 TUBA4AP68366 448 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 SLC14A1Q13336 389 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PRAMEF9Q5VWM5 478 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PPP4R4Q6NUP7 873 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 GET4Q7L5D6 327 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-203ENST00000434376 ZFAND4Q86XD8 727 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms