RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 AMIGO2Q86SJ2 522 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 METTL2AQ96IZ6 378 aaKnown RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 CCDC138Q96M89 665 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 FOPNLQ96NB1 174 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 TMEM74Q96NL1 305 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 CCM2Q9BSQ5 444 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 NDUFA13Q9P0J0 144 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 GMPR2Q9P2T1 348 aaKnown RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 MBD1Q9UIS9 605 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 NDRG2Q9UN36 371 aaKnown RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 SLC22A14Q9Y267 594 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 MUC22E2RYF6 1773 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 KCNE1BA0A087WTH5 132 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 TCRBV5S2A0A599 114 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 OR2AG2A6NM03 316 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 EPHX1P07099 455 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 FAM58BPP0C7Q3 252 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 HOXB6P17509 224 aaKnown RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 CLDN8P56748 225 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 RPS14P62263 151 aaKnown RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 TXNL4AP83876 142 aaKnown RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 PCDH1Q08174 1060 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 TMEM115Q12893 351 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 NRF1Q16656 503 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 SLC44A4Q53GD3 710 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 TMTC4Q5T4D3 741 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 FRG2Q64ET8 278 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 NEK5Q6P3R8 708 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 PARS2Q7L3T8 475 aaKnown RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 ZNF513Q8N8E2 541 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-209ENST00000433949 OR8D1Q8WZ84 308 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 GTF2H4Q92759 462 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 DTD2Q96FN9 168 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 PPP1R16AQ96I34 528 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 CNBD2Q96M20 576 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 NSMCE2Q96MF7 247 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 PPM1MQ96MI6 270 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 CCDC115Q96NT0 180 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 FRG2BQ96QU4 278 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 CIB1Q99828 191 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 ZNF696Q9H7X3 374 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 RMND5AQ9H871 391 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 THEGQ9P2T0 379 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 ZNHIT2Q9UHR6 403 aa11.6□□□□□ -0.55
CTCFL-209ENST00000433949 ERN1O75460 977 aaKnown RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 BCKDHAP12694 445 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 CCT8P50990 548 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 DGKQP52824 942 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 YBX1P67809 324 aaKnown RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 PRKCQQ04759 706 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 ZP2Q05996 745 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 CSTF3Q12996 717 aaKnown RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 ELAVL3Q14576 367 aaKnown RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 DPY19L1Q2PZI1 675 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 ZXDCQ2QGD7 858 aaPredicted RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 HNRNPA1L2Q32P51 320 aaKnown RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 GLYATQ6IB77 296 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 MSANTD1Q6ZTZ1 278 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 KLHDC8AQ8IYD2 350 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 MFSD2AQ8NA29 543 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 TESCQ96BS2 214 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 PCM1Q15154 2024 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 SLC5A10A0PJK1 596 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 TSPAN6O43657 245 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 MTHFD1P11586 935 aaKnown RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 SRFP11831 508 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 HSD3B1P14060 373 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 HSD3B2P26439 372 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 HNF4AP41235 474 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 HALP42357 657 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 HNRNPFP52597 415 aaKnown RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 METAP1P53582 386 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 PFN3P60673 137 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 PLOD1Q02809 727 aaPredicted RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 CHIT1Q13231 466 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 PUS10Q3MIT2 529 aaKnown RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 SPANXN4Q5MJ08 99 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 C6orf52Q5T4I8 152 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 RNF220Q5VTB9 566 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 SUSD1Q6UWL2 747 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 NUDT18Q6ZVK8 323 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 NLRP8Q86W28 1048 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 SLC22A15Q8IZD6 547 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 BEND7Q8N7W2 519 aaPredicted RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 RASGEF1AQ8N9B8 481 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 FBXO15Q8NCQ5 510 aaPredicted RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 OR52E4Q8NGH9 312 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 PYCR2Q96C36 320 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 ZNF514Q96K75 400 aaPredicted RBP11.59□□□□□ -0.55
CTCFL-209ENST00000433949 COQ10AQ96MF6 247 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 OR52E6Q96RD3 313 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 TRIM8Q9BZR9 551 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 GORASP2Q9H8Y8 452 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 UBAP1Q9NZ09 502 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 PADI4Q9UM07 663 aa11.59□□□□□ -0.55
CTCFL-209ENST00000433949 C7orf72A4D263 438 aa11.58□□□□□ -0.56
CTCFL-209ENST00000433949 PRMT3O60678 531 aa11.58□□□□□ -0.56
CTCFL-209ENST00000433949 CDH1P12830 882 aa11.58□□□□□ -0.56
CTCFL-209ENST00000433949 OXTRP30559 389 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms