RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 OR2L3Q8NG85 312 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 MAIP1Q8WWC4 291 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 ZNF285Q96NJ3 590 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 SPSB2Q99619 263 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 TRIM56Q9BRZ2 755 aaKnown RBP20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 SOX17Q9H6I2 414 aaPredicted RBP20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 ZBTB20Q9HC78 741 aaPredicted RBP20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 SLC6A20Q9NP91 592 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 CDC23Q9UJX2 597 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 SOX13Q9UN79 622 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 B3GNT3Q9Y2A9 372 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 CRYL1Q9Y2S2 319 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 ICE1Q9Y2F5 2266 aa20.89■□□□□ 0.93
RPUSD3-206ENST00000433535 A0A0J9YVX5 310 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 AP3B1O00203 1094 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 AVILO75366 819 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 MED26O95402 600 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 ITGA3P26006 1051 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 OR1D4P47884 311 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 YBX1P67809 324 aaKnown RBP20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 FASTKQ14296 549 aaKnown RBP20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 NKG7Q16617 165 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 HIST2H2BCQ6DN03 193 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 MRNIPQ6NTE8 343 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 IQCKQ8N0W5 287 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 RAB42Q8N4Z0 105 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 SNRNP40Q96DI7 357 aaKnown RBP20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 FOPNLQ96NB1 174 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 SLC29A3Q9BZD2 475 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 WDR54Q9H977 334 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 IL1RAPL1Q9NZN1 696 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 GALPQ9UBC7 116 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 MAU2Q9Y6X3 613 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 FAM169AQ9Y6X4 670 aa20.88■□□□□ 0.93
RPUSD3-206ENST00000433535 A0A1W2PPV9 198 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 FKBP9O95302 570 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 F7P08709 466 aaPredicted RBP20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 MMP11P24347 488 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 CCNFP41002 786 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 GBX1Q14549 363 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 EIF2S3LQ2VIR3 472 aaKnown RBP20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 WASHC2DQ5SRD0 308 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 RNF187Q5TA31 235 aaPredicted RBP20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 YOD1Q5VVQ6 348 aaPredicted RBP20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 IGFL3Q6UXB1 125 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 SDCCAG8Q86SQ7 713 aaPredicted RBP20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 CISD2Q8N5K1 135 aaKnown RBP20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 PRELID2Q8N945 189 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 OR2A1Q8NGT9 310 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 HMGCLL1Q8TB92 370 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 INPP5DQ92835 1189 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 ACAT2Q9BWD1 397 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 ILKAPQ9H0C8 392 aaPredicted RBP20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 ATP13A2Q9NQ11 1180 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 ASF1BQ9NVP2 202 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 MRFAP1Q9Y605 127 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 HS3ST3B1Q9Y662 390 aa20.87■□□□□ 0.93
RPUSD3-206ENST00000433535 LOC105369274A0A096LPK9 316 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 LOC102723532A0A0G2JNH3 316 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 FITM1A5D6W6 292 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 TARM1B6A8C7 271 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 SOCS6O14544 535 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 ONECUT2O95948 504 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 ALBP02768 609 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 PIM1P11309 404 aaPredicted RBP20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 CDK16Q00536 496 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 AIMP2Q13155 320 aaKnown RBP20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 KCNJ11Q14654 390 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 NR6A1Q15406 480 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 ANKRD22Q5VYY1 191 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 KIAA0930Q6ICG6 404 aaPredicted RBP20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 RNF44Q7L0R7 432 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 SPNS2Q8IVW8 549 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 OR4N4Q8N0Y3 316 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 TRIM58Q8NG06 486 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 SSC4DQ8WTU2 575 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 ZUFSPQ96AP4 578 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 SLC26A1Q9H2B4 701 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 KCNF1Q9H3M0 494 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 SPATA7Q9P0W8 599 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 STOX2Q9P2F5 926 aaPredicted RBP20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 PPP2R2CQ9Y2T4 447 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 CSAG2Q9Y5P2 127 aa20.86■□□□□ 0.93
RPUSD3-206ENST00000433535 DOCK10Q96BY6 2186 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 HYKKA2RU49 373 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 ARHGEF33A8MVX0 844 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 NRDCO43847 1150 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 IPO13O94829 963 aaKnown RBP20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 MATN4O95460 622 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 ESR1P03372 595 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 EIF2S1P05198 315 aaKnown RBP20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 CHRM3P20309 590 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 OGNP20774 298 aaKnown RBP20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 ATP5DP30049 168 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 SOX8P57073 446 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 GPS1Q13098 491 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 ACSBG2Q5FVE4 666 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 CASC4Q6P4E1 433 aa20.85■□□□□ 0.93
RPUSD3-206ENST00000433535 KIRREL2Q6UWL6 708 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms