RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CAPN5O15484 640 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 WDR47O94967 919 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 SLC10A3P09131 477 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 EFNA1P20827 205 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 TGM4P49221 684 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 RGS6P49758 472 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 DGKEP52429 567 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 ST3GAL4Q11206 333 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 GTF2H2Q13888 395 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 TSTQ16762 297 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 GTF2H2CQ6P1K8 395 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 PRR23CQ6ZRP0 262 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 IQCF2Q8IXL9 164 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 GLB1L3Q8NCI6 653 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 ST13P5Q8NFI4 369 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 VANGL1Q8TAA9 524 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 GPR151Q8TDV0 419 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 TMEM40Q8WWA1 233 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 DNAJB3Q8WWF6 145 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 TMCO6Q96DC7 493 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 PPP3R2Q96LZ3 170 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 ZNF382Q96SR6 550 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 SLA2Q9H6Q3 261 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 MIOSQ9NXC5 875 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 MAT2BQ9NZL9 334 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 OGDHLQ9ULD0 1010 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 IPPQ9Y573 584 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 MICAL3Q7RTP6 2002 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 CCDC182A6NF36 153 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 HHLA1C9JL84 531 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SLITRK5O94991 958 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 POU2F1P14859 743 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 FPR1P21462 350 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 CDKN2CP42773 168 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SUOXP51687 545 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 ZNF235Q14590 738 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 RAB41Q5JT25 222 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 CCDC28AQ8IWP9 274 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 FAM20CQ8IXL6 584 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 CAMKK1Q8N5S9 505 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 EFHBQ8N7U6 833 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 FCGR1BQ92637 280 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 DPH2Q9BQC3 489 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 C16orf70Q9BSU1 422 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 MAGIXQ9H6Y5 334 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 ATP13A1Q9HD20 1204 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SAMD4AQ9UPU9 718 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 HSPE1-MOB4S4R3N1 261 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 DNAH12Q6ZR08 3092 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 CENPFP49454 3210 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 IFRD1O00458 451 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 RGS14O43566 566 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 IL7P13232 177 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 HOXB8P17481 243 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 S100A3P33764 101 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SLC14A1Q13336 389 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 KIAA0040Q15053 153 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 PTPRRQ15256 657 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 GNASQ5JWF2 1037 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SUSD1Q6UWL2 747 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 GALNT7Q86SF2 657 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 ZNF605Q86T29 641 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 TMEM132CQ8N3T6 1108 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 CHAC2Q8WUX2 184 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 NSUN3Q9H649 340 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 AASDHPPTQ9NRN7 309 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SNTG1Q9NSN8 517 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 NPAP1Q9NZP6 1156 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SPASTQ9UBP0 616 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 A0A0X1KG70 313 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 UPK3BL1B0FP48 263 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 UPK3BL2E5RIL1 263 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 OR7A17O14581 309 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 TEX28O15482 410 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 ARHGEF9O43307 516 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 ULK1O75385 1050 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 PEX11BO96011 259 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 IL6P05231 212 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 CHRM5P08912 532 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 ADORA3P0DMS8 318 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 DPEP1P16444 411 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 CBLP22681 906 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 PIK3CBP42338 1070 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 OR3A3P47888 321 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 RFX2P48378 723 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SCN4BQ8IWT1 228 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SPERTQ8NA61 448 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 BRSK1Q8TDC3 778 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 ULK4Q96C45 1275 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 OR5M11Q96RB7 305 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 IL1RAPQ9NPH3 570 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 DYRK4Q9NR20 520 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 ABCB8Q9NUT2 735 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 PCDHGA6Q9Y5G7 932 aa11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 MN1Q10571 1320 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-202ENST00000433297 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 A0A0G2JMP0 313 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 A0A1W2PQ09 198 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 SMIM30A4D0T7 59 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms