RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 KAT2AQ92830 837 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 KIFC1Q9BW19 673 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 REXO4Q9GZR2 422 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 CCL26Q9Y258 94 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 JUNP05412 331 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 CHRNGP07510 517 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 ALOX5P09917 674 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 ACADSP16219 412 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 PTPN5P54829 565 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 RPS15P62841 145 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 MGAT3Q09327 533 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 ACSBG2Q5FVE4 666 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 AMIGO1Q86WK6 493 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 KCNJ9Q92806 393 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 NEK6Q9HC98 313 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 LINC00854A0A1B0GVQ3 168 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 IMPDH1P20839 514 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 ACRV1P26436 265 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 CD6P30203 668 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 SPINT3P49223 89 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 LGALS3BPQ08380 585 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 OR4K17Q8NGC6 315 aa16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 UHRF1Q96T88 793 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 IFT80Q9P2H3 777 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-203ENST00000429416 NPHS1O60500 1241 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 TPST2O60704 377 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 FHP07954 510 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 CXCL16Q9H2A7 254 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 METTL7AQ9H8H3 244 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 SAMD4AQ9UPU9 718 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 PAPSS2O95340 614 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 NIPAL4Q0D2K0 466 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 C1orf189Q5VU69 101 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 JAZF1Q86VZ6 243 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 PRR11Q96HE9 360 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 ART5Q96L15 291 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 PHF11Q9UIL8 331 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 MCM8Q9UJA3 840 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 MAP2K7O14733 419 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 IFNGP01579 166 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 SOX6P35712 828 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 GPR68Q15743 365 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 IQCKQ8N0W5 287 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 DLG3Q92796 817 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 CTPS2Q9NRF8 586 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 IKZF3Q9UKT9 509 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 GLOD5A6NK44 160 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 A8MT66 165 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 YAP1P46937 504 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 KHKP50053 298 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 PER3P56645 1201 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 ERICH5Q6P6B1 374 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 NEK10Q6ZWH5 1172 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 GPR141Q7Z602 305 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 PTCHD1Q96NR3 888 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 HOPXQ9BPY8 73 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 TPRKBQ9Y3C4 175 aa16.64■□□□□ 0.25
SMARCA4-203ENST00000429416 RPS13P62277 151 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 RANBP3LQ86VV4 465 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 PHF7Q9BWX1 381 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 DLGAP2Q9P1A6 1054 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 GMPPBQ9Y5P6 360 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 TOGARAM1Q9Y4F4 1720 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 DHRS12A0PJE2 317 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 FAM25AB3EWG3 89 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 FAM25CB3EWG5 89 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 FAM25GB3EWG6 89 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 MSS51Q4VC12 460 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 GLYATQ6IB77 296 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 GPR149Q86SP6 731 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 NPAS3Q8IXF0 933 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 OR5AK3PQ8NH89 298 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 ARMC5Q96C12 935 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 SCRN2Q96FV2 425 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 CCDC28BQ9BUN5 200 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 TBC1D17Q9HA65 648 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 DNAAF2Q9NVR5 837 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 CFL2Q9Y281 166 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 ZNF487B1APH4 448 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 NFE2L1Q14494 772 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 GRIN2CQ14957 1233 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 OR52J3Q8NH60 311 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 MVB12BQ9H7P6 319 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 MAGEL2Q9UJ55 1249 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 MOGSQ13724 837 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 KIAA0319Q5VV43 1072 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 GAREM2Q75VX8 874 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 CPXM2Q8N436 756 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 THAP3Q8WTV1 239 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 CENPIQ92674 756 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 TJP1Q07157 1748 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 MAP1BP46821 2468 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 BTN3A3O00478 584 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 IFNW1P05000 195 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 MRPS21P82921 87 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 SP140Q13342 867 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 TGFBIQ15582 683 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 PSAPL1Q6NUJ1 521 aa16.63■□□□□ 0.25
SMARCA4-203ENST00000429416 MOSPD2Q8NHP6 518 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms