RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 RPS26P62854 115 aaKnown RBP8.14□□□□□ -1.11
CD44-208ENST00000428726 FPGSQ05932 587 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 VAC14Q08AM6 782 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 ARHGEF6Q15052 776 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 TMTC4Q5T4D3 741 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 OGFOD2Q6N063 350 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 ZCCHC8Q6NZY4 707 aaKnown RBP8.14□□□□□ -1.11
CD44-208ENST00000428726 TTC33Q6PID6 262 aaPredicted RBP8.14□□□□□ -1.11
CD44-208ENST00000428726 TPRG1Q6ZUI0 275 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 SPATA19Q7Z5L4 167 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 ADCK2Q7Z695 626 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 ADAMTSL2Q86TH1 951 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 RASGEF1AQ8N9B8 481 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 NETO1Q8TDF5 533 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 UCN3Q969E3 161 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 VOPP1Q96AW1 172 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 DUS3LQ96G46 650 aaKnown RBP8.14□□□□□ -1.11
CD44-208ENST00000428726 NSMCE2Q96MF7 247 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 EFHD1Q9BUP0 239 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 LRRC3Q9BY71 257 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 XKR8Q9H6D3 395 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 CTPS2Q9NRF8 586 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 PKD2L2Q9NZM6 624 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 PLEKHM1Q9Y4G2 1056 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 PCDHB14Q9Y5E9 798 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 SEC16AO15027 2179 aa8.14□□□□□ -1.11
CD44-208ENST00000428726 A0A1W2PPW3 197 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 SYNDIG1LA6NDD5 238 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 GLOD5A6NK44 160 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 MAGEB17A8MXT2 336 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 K7EPI3 171 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 TULP3O75386 442 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 FKBP9O95302 570 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 PGRP06401 933 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 ANXA5P08758 320 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 HPCAP84074 193 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CTBSQ01459 385 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 OCA2Q04671 838 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 GRIK2Q13002 908 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CDKN3Q16667 212 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 FKBP9P1Q75LS8 142 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CYP2U1Q7Z449 544 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 MEX3DQ86XN8 651 aaKnown RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 ADGRG5Q8IZF4 528 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 TMEM199Q8N511 208 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 FIBINQ8TAL6 211 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 TSPEARQ8WU66 669 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 SMG7Q92540 1137 aaKnown RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 RELTQ969Z4 430 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 SH3KBP1Q96B97 665 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CHFRQ96EP1 664 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CGREF1Q99674 301 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 DGCR6LQ9BY27 220 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 PAIP1Q9H074 479 aaKnown RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 SPNS1Q9H2V7 528 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CD93Q9NPY3 652 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 RIC8BQ9NVN3 520 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 GID8Q9NWU2 228 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CABIN1Q9Y6J0 2220 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 ANAPC1Q9H1A4 1944 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 TCRBV3S1A0A5B6 114 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 FEZF1A0PJY2 475 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 C16orf96A6NNT2 1141 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 ARHGEF33A8MVX0 844 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 MANBAO00462 879 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CLOCKO15516 846 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 PAK4O96013 591 aaPredicted RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 OTCP00480 354 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 PCCBP05166 539 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 EPHX1P07099 455 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 ATP1B2P14415 290 aaPredicted RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 CD247P20963 164 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 FASP25445 335 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 EPHA2P29317 976 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 SLC7A1P30825 629 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 GNPDA1P46926 289 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 ALDH9A1P49189 494 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CLCN2P51788 898 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 PRMT2P55345 433 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 AP1S1P61966 158 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 BNIP3Q12983 259 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 COQ5Q5HYK3 327 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 NHSL2Q5HYW2 709 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 KLHL35Q6PF15 583 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 CERS6Q6ZMG9 384 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 PARS2Q7L3T8 475 aaKnown RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 TMEM179BQ7Z7N9 219 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 RAVER1Q8IY67 606 aaKnown RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 MINDY1Q8N5J2 469 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 MRPL43Q8N983 215 aaKnown RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 OR2T12Q8NG77 320 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 RMND5BQ96G75 393 aaPredicted RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 MUS81Q96NY9 551 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 GPATCH1Q9BRR8 931 aaKnown RBP8.13□□□□□ -1.11
CD44-208ENST00000428726 LGR4Q9BXB1 951 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 TRIM39Q9HCM9 518 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 RASSF1Q9NS23 344 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 RHCGQ9UBD6 479 aa8.13□□□□□ -1.11
CD44-208ENST00000428726 PPT2Q9UMR5 302 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms