RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 FAM57AQ8TBR7 257 aa13.64□□□□□ -0.23
PDE6D-203ENST00000428104 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
PDE6D-203ENST00000428104 ZNF285Q96NJ3 590 aa13.64□□□□□ -0.23
PDE6D-203ENST00000428104 ASF1AQ9Y294 204 aa13.64□□□□□ -0.23
PDE6D-203ENST00000428104 IGLV3-12A0A075B6K2 115 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 LOC285095A0A1B0GVY8 99 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 RCCD1A6NED2 376 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 FAM171A2A8MVW0 826 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 RASGRF2O14827 1237 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 STX7O15400 261 aaKnown RBP13.63□□□□□ -0.23
PDE6D-203ENST00000428104 SRP72O76094 671 aaKnown RBP13.63□□□□□ -0.23
PDE6D-203ENST00000428104 HEXBP07686 556 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 RALBP11234 206 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 ICAM2P13598 275 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 CD46P15529 392 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 ZNF24P17028 368 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 PTGS2P35354 604 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 WNT3AP56704 352 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 VSX2P58304 361 aaPredicted RBP13.63□□□□□ -0.23
PDE6D-203ENST00000428104 AP2B1P63010 937 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 RPA4Q13156 261 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 SNTB1Q13884 538 aaKnown RBP13.63□□□□□ -0.23
PDE6D-203ENST00000428104 FASTKQ14296 549 aaKnown RBP13.63□□□□□ -0.23
PDE6D-203ENST00000428104 FAM214AQ32MH5 1076 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 WASHC2DQ5SRD0 308 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 TMEM211Q6ICI0 200 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 CPNE8Q86YQ8 564 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 NIPA2Q8N8Q9 360 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 KCTD6Q8NC69 237 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 GOT1L1Q8NHS2 421 aaPredicted RBP13.63□□□□□ -0.23
PDE6D-203ENST00000428104 IMMP1LQ96LU5 166 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 FAM96AQ9H5X1 160 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 HACD3Q9P035 362 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 FKBPLQ9UIM3 349 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 GNPTGQ9UJJ9 305 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 MKL2Q9ULH7 1088 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 HEY1Q9Y5J3 304 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 ARL5AQ9Y689 179 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 GTF3C1Q12789 2109 aa13.63□□□□□ -0.23
PDE6D-203ENST00000428104 LOC102723996A0A087X1L8 192 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 HYKKA2RU49 373 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 INAFM1C9JVW0 142 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 ATE1O95260 518 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 CCDC172P0C7W6 258 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 ATP1B2P14415 290 aaPredicted RBP13.62□□□□□ -0.23
PDE6D-203ENST00000428104 EFNA3P52797 238 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 PMPCAQ10713 525 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 PRMT9Q6P2P2 845 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 ZNF449Q6P9G9 518 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 CHSY3Q70JA7 882 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 C2orf73Q8N5S3 287 aaPredicted RBP13.62□□□□□ -0.23
PDE6D-203ENST00000428104 CPSF7Q8N684 471 aaKnown RBP13.62□□□□□ -0.23
PDE6D-203ENST00000428104 TMEM178AQ8NBL3 297 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 FAF2Q96CS3 445 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 ZNF354BQ96LW1 612 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 UTP23Q9BRU9 249 aaKnown RBP13.62□□□□□ -0.23
PDE6D-203ENST00000428104 YIPF2Q9BWQ6 316 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 ENAMQ9NRM1 1142 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 TRPC4Q9UBN4 977 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 CRLS1Q9UJA2 301 aa13.62□□□□□ -0.23
PDE6D-203ENST00000428104 HIVEP2P31629 2446 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 A0A0A6YYK5 440 aaPredicted RBP13.61□□□□□ -0.23
PDE6D-203ENST00000428104 A0A1B0GTH9 108 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 MAN1A2O60476 641 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 SEC24DO94855 1032 aaPredicted RBP13.61□□□□□ -0.23
PDE6D-203ENST00000428104 RAF1P04049 648 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 TPM2P07951 284 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 GZMAP12544 262 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 ZC3H12BQ5HYM0 836 aaKnown RBP13.61□□□□□ -0.23
PDE6D-203ENST00000428104 FRMPD2BQ6IN97 320 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 FIGLAQ6QHK4 219 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 MICALCLQ6ZW33 695 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 ZNF571Q7Z3V5 609 aaPredicted RBP13.61□□□□□ -0.23
PDE6D-203ENST00000428104 TAX1BP1Q86VP1 789 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 TBC1D21Q8IYX1 336 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 LINC01555Q8NAE3 123 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 FAM98AQ8NCA5 519 aaKnown RBP13.61□□□□□ -0.23
PDE6D-203ENST00000428104 OR4K2Q8NGD2 314 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 COPS8Q99627 209 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 NPAS2Q99743 824 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 TUBB6Q9BUF5 446 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 THAP2Q9H0W7 228 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.61□□□□□ -0.23
PDE6D-203ENST00000428104 ZC3H7BQ9UGR2 993 aaKnown RBP13.61□□□□□ -0.23
PDE6D-203ENST00000428104 FAM153AQ9UHL3 310 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 POLG2Q9UHN1 485 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 ANAPC7Q9UJX3 599 aa13.61□□□□□ -0.23
PDE6D-203ENST00000428104 IGHV3-20A0A0C4DH32 117 aa13.6□□□□□ -0.23
PDE6D-203ENST00000428104 CFAP99D6REC4 459 aa13.6□□□□□ -0.23
PDE6D-203ENST00000428104 DDX3XO00571 662 aaKnown RBP eCLIP13.6□□□□□ -0.237e-18■■■■■ 46.4
PDE6D-203ENST00000428104 CTSVO60911 334 aa13.6□□□□□ -0.23
PDE6D-203ENST00000428104 SP1P08047 785 aa13.6□□□□□ -0.23
PDE6D-203ENST00000428104 MYBL1P10243 752 aa13.6□□□□□ -0.23
PDE6D-203ENST00000428104 CDK11BP21127 795 aaKnown RBP13.6□□□□□ -0.23
PDE6D-203ENST00000428104 ACADLP28330 430 aa13.6□□□□□ -0.23
PDE6D-203ENST00000428104 CD68P34810 354 aaPredicted RBP13.6□□□□□ -0.23
PDE6D-203ENST00000428104 NUP107P57740 925 aa13.6□□□□□ -0.23
PDE6D-203ENST00000428104 XIAPP98170 497 aa13.6□□□□□ -0.23
PDE6D-203ENST00000428104 OC90Q02509 493 aaPredicted RBP13.6□□□□□ -0.23
PDE6D-203ENST00000428104 KEAP1Q14145 624 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms