RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 LRRC39Q96DD0 335 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 MED30Q96HR3 178 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 ANKRD36BP1Q96IX9 119 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 LMLNQ96KR4 655 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 MCEEQ96PE7 176 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 PAFAH2Q99487 392 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 PIMREGQ9BSJ6 248 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 HTATIP2Q9BUP3 242 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 KIFC3Q9BVG8 833 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 PHF7Q9BWX1 381 aaPredicted RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 DNAI2Q9GZS0 605 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 WWP1Q9H0M0 922 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 TLE6Q9H808 572 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 ACAD9Q9H845 621 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 SFXN1Q9H9B4 322 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 DNAJC17Q9NVM6 304 aaKnown RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 ASNSD1Q9NWL6 643 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 NKIRAS2Q9NYR9 191 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 DNPEPQ9ULA0 475 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 R3HDM2Q9Y2K5 976 aaKnown RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 CLRN2A0PK11 232 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 NPIPB13A6NJU9 1138 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 NPIPB5A8MRT5 1133 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TTC34A8MYJ7 566 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF487B1APH4 448 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 NPIPB4C9JG80 1138 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TNFRSF13BO14836 293 aaPredicted RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ALOX15BO15296 676 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 NVLO15381 856 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 KLK10O43240 276 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 DOK2O60496 412 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 PEX11AO75192 247 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 NEBLO76041 1014 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ASS1P00966 412 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 IFNB1P01574 187 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 RPSAP08865 295 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TPBGLP0DKB5 382 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 KRT10P13645 584 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ARSAP15289 507 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TGM2P21980 687 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 PRPH2P23942 346 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 PSMA2P25787 234 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 AVPR2P30518 371 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 KRT20P35900 424 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 CDKN2BP42772 138 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 SERPINB9P50453 376 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 SNX16P57768 344 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 NLRP11P59045 1033 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 BASP1P80723 227 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TFDP1Q14186 410 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 RBBP5Q15291 538 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 SMTNL2Q2TAL5 461 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF699Q32M78 642 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TRMT5Q32P41 509 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF449Q6P9G9 518 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF474Q6S9Z5 364 aaPredicted RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 MFSD7Q6UXD7 560 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ANKRD23Q86SG2 305 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 PHLDB2Q86SQ0 1253 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 RBM23Q86U06 439 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 RHPN2Q8IUC4 686 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 MAP7D3Q8IWC1 876 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 C4orf33Q8N1A6 199 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ARHGAP18Q8N392 663 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 KIF2BQ8N4N8 673 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 OIT3Q8WWZ8 545 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 DNAJC9Q8WXX5 260 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 DNASE2BQ8WZ79 361 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 NR4A3Q92570 626 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 SPDL1Q96EA4 605 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 THOC1Q96FV9 657 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 PRMT6Q96LA8 375 aaPredicted RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 C12orf42Q96LP6 360 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF570Q96NI8 536 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 GPR78Q96P69 363 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 OLFM3Q96PB7 478 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 NUDCD1Q96RS6 583 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 FERMT1Q9BQL6 677 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 HEMGNQ9BXL5 484 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TEX13BQ9BXU2 312 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 GCOM2Q9BZD3 368 aaPredicted RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 PORCNQ9H237 461 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 SYNCQ9H7C4 482 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 IL21RQ9HBE5 538 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TXNRD2Q9NNW7 524 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 CD93Q9NPY3 652 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF302Q9NR11 478 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TLR8Q9NR97 1041 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 IL1RAPL1Q9NZN1 696 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 PAK5Q9P286 719 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 CPSF2Q9P2I0 782 aaKnown RBP4.97□□□□□ -1.61
LINC00458-202ENST00000427299 DNAJB4Q9UDY4 337 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 CHKBQ9Y259 395 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 PATJQ8NI35 1801 aa4.97□□□□□ -1.61
LINC00458-202ENST00000427299 TRIP12Q14669 1992 aaPredicted RBP4.96□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF638Q14966 1978 aaKnown RBP4.96□□□□□ -1.61
LINC00458-202ENST00000427299 SBF1O95248 1867 aa4.96□□□□□ -1.61
LINC00458-202ENST00000427299 FAM90A7PA6NKC0 464 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 FAM90A22PA8MWA6 464 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms