RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 A0A1W2PPV9 198 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 GSAPA4D1B5 854 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 ISM1B1AKI9 464 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 DHRS4L1P0CG22 281 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 NPPBP16860 134 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 PRDX3P30048 256 aaKnown RBP14.89□□□□□ -0.03
COL11A1-204ENST00000427239 GDF5P43026 501 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 HSPA7P48741 367 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 TBPL1P62380 186 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 HERVK_113P63132 956 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 CCL7P80098 99 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 PRDX1Q06830 199 aaKnown RBP14.89□□□□□ -0.03
COL11A1-204ENST00000427239 TSTA3Q13630 321 aaPredicted RBP14.89□□□□□ -0.03
COL11A1-204ENST00000427239 SF1Q15637 639 aaKnown RBP14.89□□□□□ -0.03
COL11A1-204ENST00000427239 HHATQ5VTY9 493 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 NKAIN2Q5VXU1 208 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 THOC6Q86W42 341 aaKnown RBP14.89□□□□□ -0.03
COL11A1-204ENST00000427239 ANKRD42Q8N9B4 389 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 LMNTD1Q8N9Z9 388 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 DEFB124Q8NES8 71 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 OR2A1Q8NGT9 310 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 TMEM79Q9BSE2 394 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 ERVK-6Q9BXR3 956 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 SPHK1Q9NYA1 384 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 ACTR10Q9NZ32 417 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 OPTCQ9UBM4 332 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 SLC22A14Q9Y267 594 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 KCNE2Q9Y6J6 123 aa14.89□□□□□ -0.03
COL11A1-204ENST00000427239 A0A1W2PQM1 296 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 K7EPI3 171 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 CAPN5O15484 640 aaPredicted RBP14.88□□□□□ -0.03
COL11A1-204ENST00000427239 TRIM13O60858 407 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 RFPL3O75679 317 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 WDR47O94967 919 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 RPLP0P05388 317 aaKnown RBP14.88□□□□□ -0.03
COL11A1-204ENST00000427239 BPGMP07738 259 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 NR1D1P20393 614 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 SERPINB4P48594 390 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 PIK3CGP48736 1102 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 AGTR2P50052 363 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 ABATP80404 500 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 PCLAFQ15004 111 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 LIPMQ5VYY2 423 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 TMEM71Q6P5X7 295 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 SPESP1Q6UW49 350 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 LCTLQ6UWM7 567 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 USP53Q70EK8 1073 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 LRRC70Q7Z2Q7 622 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 C10orf107Q8IVU9 208 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 CARFQ8N187 725 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 ARFGAP2Q8N6H7 521 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 ESAMQ96AP7 390 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 FAM122AQ96E09 287 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 L3HYPDHQ96EM0 354 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 OR2A14Q96R47 310 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 GFM1Q96RP9 751 aaKnown RBP14.88□□□□□ -0.03
COL11A1-204ENST00000427239 CD180Q99467 661 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 POMT2Q9UKY4 750 aa14.88□□□□□ -0.03
COL11A1-204ENST00000427239 NTN3O00634 580 aaPredicted RBP14.87□□□□□ -0.03
COL11A1-204ENST00000427239 TOX3O15405 576 aaPredicted RBP14.87□□□□□ -0.03
COL11A1-204ENST00000427239 CCNT2O60583 730 aaKnown RBP14.87□□□□□ -0.03
COL11A1-204ENST00000427239 KATNA1O75449 491 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 CCNDBP1O95273 360 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 SIX3O95343 332 aaPredicted RBP14.87□□□□□ -0.03
COL11A1-204ENST00000427239 EPB42P16452 691 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 UGT2B7P16662 529 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 HRH2P25021 359 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 EEF1DP29692 281 aaKnown RBP14.87□□□□□ -0.03
COL11A1-204ENST00000427239 ALDH3A1P30838 453 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 GABPB1Q06547 395 aaPredicted RBP14.87□□□□□ -0.03
COL11A1-204ENST00000427239 SLC5A12Q1EHB4 618 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 C18orf21Q32NC0 220 aaPredicted RBP14.87□□□□□ -0.03
COL11A1-204ENST00000427239 FBXO48Q5FWF7 155 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 ZNF678Q5SXM1 525 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 PRAMEF13Q5VWM6 474 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 IRGCQ6NXR0 463 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 NUDCD3Q8IVD9 361 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 DNAJC11Q9NVH1 559 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 GPRC5BQ9NZH0 403 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 TAC3Q9UHF0 121 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 ANGPTL3Q9Y5C1 460 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 ASXL3Q9C0F0 2248 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 PIEZO1Q92508 2521 aa14.87□□□□□ -0.03
COL11A1-204ENST00000427239 ANKRD12Q6UB98 2062 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 E2F3O00716 465 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 C9P02748 559 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 GNAZP19086 355 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 CMPK1P30085 196 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 PEBP1P30086 187 aaKnown RBP14.86□□□□□ -0.03
COL11A1-204ENST00000427239 NAGLUP54802 743 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 WDR4P57081 412 aaKnown RBP14.86□□□□□ -0.03
COL11A1-204ENST00000427239 CFHR1Q03591 330 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 SPIDRQ14159 915 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 NAA25Q14CX7 972 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 PDK4Q16654 411 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 ICE2Q659A1 982 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 TAX1BP1Q86VP1 789 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 OR2L3Q8NG85 312 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 OR4D9Q8NGE8 314 aa14.86□□□□□ -0.03
COL11A1-204ENST00000427239 FLVCR1-AS1Q8TAF5 88 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms