RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 NPIPA1Q9UND3 350 aa13.5□□□□□ -0.25
HDAC6-206ENST00000426196 IGLV3-12A0A075B6K2 115 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 HYKKA2RU49 373 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 C3orf70A6NLC5 250 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-206ENST00000426196 RASGRF2O14827 1237 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 SRPX2O60687 465 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-206ENST00000426196 AP2A2O94973 939 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 S1PR4O95977 384 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 AGTP01019 485 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 HEXBP07686 556 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 PKLRP30613 574 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 FOXD4Q12950 439 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-206ENST00000426196 OLIG2Q13516 323 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 BRD3Q15059 726 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 FILIP1LQ4L180 1135 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 WASHC2DQ5SRD0 308 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 ALKBH5Q6P6C2 394 aaKnown RBP13.49□□□□□ -0.25
HDAC6-206ENST00000426196 C3P1Q6ZMU1 363 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 LAPTM4BQ86VI4 370 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 SERPINA9Q86WD7 417 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 ZNF567Q8N184 647 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 TAB3Q8N5C8 712 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-206ENST00000426196 ELMO1Q92556 727 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 HSD3B7Q9H2F3 369 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 C14orf105Q9NVL8 296 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 KCNN3Q9UGI6 736 aa13.49□□□□□ -0.25
HDAC6-206ENST00000426196 A0A087X0T9 212 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 RCCD1A6NED2 376 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 QSOX1O00391 747 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 ASNA1O43681 348 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 SLCO2B1O94956 709 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 ZWINTO95229 277 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 FTH1P02794 183 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 KRT1P04264 644 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 FAM228BP0C875 321 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 FOSL1P15407 271 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 EEF1DP29692 281 aaKnown RBP13.48□□□□□ -0.25
HDAC6-206ENST00000426196 MC4RP32245 332 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 ZNF140P52738 457 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-206ENST00000426196 GEMP55040 296 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 PLOD1Q02809 727 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-206ENST00000426196 PCOLCEQ15113 449 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 SF1Q15637 639 aaKnown RBP13.48□□□□□ -0.25
HDAC6-206ENST00000426196 MUM1Q2TAK8 710 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 TAS2R42Q7RTR8 314 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 TAX1BP1Q86VP1 789 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 DOLPP1Q86YN1 238 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 TMTC1Q8IUR5 882 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 LINC01555Q8NAE3 123 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 FAM98AQ8NCA5 519 aaKnown RBP13.48□□□□□ -0.25
HDAC6-206ENST00000426196 NRGNQ92686 78 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 C19orf43Q9BQ61 176 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 YIPF2Q9BWQ6 316 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 ZNF700Q9H0M5 742 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 SLC24A3Q9HC58 644 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 KLHL1Q9NR64 748 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 CCM2LQ9NUG4 571 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-206ENST00000426196 SAE1Q9UBE0 346 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-206ENST00000426196 TRPC4Q9UBN4 977 aa13.48□□□□□ -0.25
HDAC6-206ENST00000426196 LOC102723996A0A087X1L8 192 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 TRBV5-4A0A0C4DH59 114 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 A8MUI8 341 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 PRPF4O43172 522 aaKnown RBP eCLIP13.47□□□□□ -0.252e-9■■■■■ 34.3
HDAC6-206ENST00000426196 ANXA9O76027 345 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 FKBP9O95302 570 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 MED26O95402 600 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 SERPING1P05155 500 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 ERVK-10P10266 1014 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 ARHGAP25P42331 645 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 CDKN1CP49918 316 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-206ENST00000426196 MYBPHQ13203 477 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 DSG2Q14126 1118 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 MESDQ14696 234 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 STX1AQ16623 288 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 DMRTC2Q8IXT2 367 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-206ENST00000426196 C2orf73Q8N5S3 287 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-206ENST00000426196 TMEM178AQ8NBL3 297 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 ASB5Q8WWX0 329 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 CTNNBL1Q8WYA6 563 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-206ENST00000426196 ZUFSPQ96AP4 578 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 FRMD6Q96NE9 622 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 NPDC1Q9NQX5 325 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-206ENST00000426196 SMARCAL1Q9NZC9 954 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 ZC3H7BQ9UGR2 993 aaKnown RBP13.47□□□□□ -0.25
HDAC6-206ENST00000426196 TRHDEQ9UKU6 1024 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 CDC14AQ9UNH5 594 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
HDAC6-206ENST00000426196 HEATR5BQ9P2D3 2071 aa13.47□□□□□ -0.25
HDAC6-206ENST00000426196 PHF3Q92576 2039 aaKnown RBP13.46□□□□□ -0.25
HDAC6-206ENST00000426196 FAM90A27PA6NNH2 459 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 TARM1B6A8C7 271 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 BHMG1C9JSJ3 638 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-206ENST00000426196 CCL22O00626 93 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 ADAM10O14672 748 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 CTSVO60911 334 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 RPN2P04844 631 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 EIF2S1P05198 315 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms