RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 CNOT10Q9H9A5 744 aaKnown RBP6.06□□□□□ -1.44
HMGB1P32-201ENST00000425971 PIH1D3Q9NQM4 214 aaKnown RBP6.06□□□□□ -1.44
HMGB1P32-201ENST00000425971 MRGBPQ9NV56 204 aa6.06□□□□□ -1.44
HMGB1P32-201ENST00000425971 ANKRD17O75179 2603 aaKnown RBP6.06□□□□□ -1.44
HMGB1P32-201ENST00000425971 MROH7Q68CQ1 1323 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 SCN5AQ14524 2016 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 SIP14410 1827 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 ZNF236Q9UL36 1845 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 A0A1W2PPM1 405 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 FEZF1A0PJY2 475 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 OR2M5A3KFT3 312 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 HEPACAM2A8MVW5 462 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 ZBTB43O43298 467 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 MBTPS2O43462 519 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 CLDN14O95500 239 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 LINC00271P0C7V0 271 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 PFKFB1P16118 471 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 HOXA11P31270 313 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 TERF1P54274 439 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 HNRNPKP61978 463 aaKnown RBP eCLIP6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 RBP5P82980 135 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 PPARDQ03181 441 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 RUNX1T1Q06455 604 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 NFATC4Q14934 902 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 LRCH2Q5VUJ6 765 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 ALS2CLQ60I27 953 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 FAM122CQ6P4D5 195 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 DCLRE1AQ6PJP8 1040 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 FIGLAQ6QHK4 219 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 TMCO2Q7Z6W1 182 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 CENPVQ7Z7K6 275 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 C1orf87Q8N0U7 546 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 PAPD5Q8NDF8 572 aaKnown RBP6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 SLC38A5Q8WUX1 472 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 TANKQ92844 425 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 SECISBP2LQ93073 1101 aaKnown RBP6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 SCMH1Q96GD3 660 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 OR1F2PQ96R84 312 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 MOV10L1Q9BXT6 1211 aaKnown RBP6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 SLC29A3Q9BZD2 475 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 FAM129AQ9BZQ8 928 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 ZWILCHQ9H900 591 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 EQTNQ9NQ60 294 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 PRMT7Q9NVM4 692 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 KLHL9Q9P2J3 617 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 AMDHD2Q9Y303 409 aa6.05□□□□□ -1.44
HMGB1P32-201ENST00000425971 CNOT1A5YKK6 2376 aaKnown RBP6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 SYNRGQ9UMZ2 1314 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 IPO8O15397 1037 aaKnown RBP6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 SSX4O60224 188 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 KDM4BO94953 1096 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 CDK3Q00526 305 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 PDE1BQ01064 536 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 NR1D2Q14995 579 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 CALCRLQ16602 461 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 TCEAL5Q5H9L2 206 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 TRAT1Q6PIZ9 186 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 SUSD1Q6UWL2 747 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 ERN2Q76MJ5 926 aaKnown RBP6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 MAP7D3Q8IWC1 876 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 MAML2Q8IZL2 1156 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 RBMXL3Q8N7X1 1067 aaKnown RBP6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 PIGTQ969N2 578 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 MTBPQ96DY7 904 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 FAM84BQ96KN1 310 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 C3orf30Q96M34 536 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 RAB3IPQ96QF0 476 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 OR6C1Q96RD1 312 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 C16orf70Q9BSU1 422 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 MRPL44Q9H9J2 332 aaKnown RBP6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 TMEM30AQ9NV96 361 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 SMARCAL1Q9NZC9 954 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 ZNF224Q9NZL3 707 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 SIX4Q9UIU6 781 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 LIPGQ9Y5X9 500 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 NFS1Q9Y697 457 aa6.04□□□□□ -1.44
HMGB1P32-201ENST00000425971 A0A0B4J293 547 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 LILRA5A6NI73 299 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 SRRM3A6NNA2 597 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 CCDC188H7C350 402 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 WISP2O76076 250 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 ZNF12P17014 697 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 ERCC2P18074 760 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 HOXC8P31273 242 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 GP5P40197 560 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 COG7P83436 770 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 TROAPQ12815 778 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 PTPRCAPQ14761 206 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 FAM198BQ6UWH4 519 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 DEFB128Q7Z7B8 93 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 RPAINQ86UA6 219 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 TMEM173Q86WV6 379 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 C1orf52Q8N6N3 182 aaKnown RBP6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 OR52I2Q8NH67 350 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 EXD1Q8NHP7 514 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 BBS10Q8TAM1 723 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 ABTB1Q969K4 478 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 NXNL1Q96CM4 212 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 PHF21BQ96EK2 531 aa6.03□□□□□ -1.44
HMGB1P32-201ENST00000425971 SIPA1Q96FS4 1042 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms