RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ARFIP2P53365 341 aa10□□□□□ -0.81
MDC1-205ENST00000425072 ABATP80404 500 aa10□□□□□ -0.81
MDC1-205ENST00000425072 IRF8Q02556 426 aa10□□□□□ -0.81
MDC1-205ENST00000425072 TSTA3Q13630 321 aaPredicted RBP10□□□□□ -0.81
MDC1-205ENST00000425072 SUZ12Q15022 739 aaKnown RBP10□□□□□ -0.81
MDC1-205ENST00000425072 TBCCQ15814 346 aa10□□□□□ -0.81
MDC1-205ENST00000425072 C18orf21Q32NC0 220 aaPredicted RBP10□□□□□ -0.81
MDC1-205ENST00000425072 FBXO48Q5FWF7 155 aa10□□□□□ -0.81
MDC1-205ENST00000425072 PAGE2BQ5JRK9 111 aa10□□□□□ -0.81
MDC1-205ENST00000425072 SH2D4BQ5SQS7 431 aa10□□□□□ -0.81
MDC1-205ENST00000425072 C10orf62Q5T681 223 aaPredicted RBP10□□□□□ -0.81
MDC1-205ENST00000425072 CES4AQ5XG92 561 aa10□□□□□ -0.81
MDC1-205ENST00000425072 LAYNQ6UX15 382 aa10□□□□□ -0.81
MDC1-205ENST00000425072 MBOAT1Q6ZNC8 495 aa10□□□□□ -0.81
MDC1-205ENST00000425072 SPATA21Q7Z572 469 aa10□□□□□ -0.81
MDC1-205ENST00000425072 NAGSQ8N159 534 aa10□□□□□ -0.81
MDC1-205ENST00000425072 ARL14Q8N4G2 192 aa10□□□□□ -0.81
MDC1-205ENST00000425072 ZNF781Q8N8C0 355 aa10□□□□□ -0.81
MDC1-205ENST00000425072 ZNF548Q8NEK5 533 aaPredicted RBP10□□□□□ -0.81
MDC1-205ENST00000425072 OR4E2Q8NGC2 313 aa10□□□□□ -0.81
MDC1-205ENST00000425072 OR52E1Q8NGJ3 308 aa10□□□□□ -0.81
MDC1-205ENST00000425072 ZNF473Q8WTR7 871 aaKnown RBP10□□□□□ -0.81
MDC1-205ENST00000425072 UBE2E3Q969T4 207 aa10□□□□□ -0.81
MDC1-205ENST00000425072 PYCR2Q96C36 320 aa10□□□□□ -0.81
MDC1-205ENST00000425072 MOCOSQ96EN8 888 aa10□□□□□ -0.81
MDC1-205ENST00000425072 TMEM79Q9BSE2 394 aa10□□□□□ -0.81
MDC1-205ENST00000425072 ZBTB26Q9HCK0 441 aa10□□□□□ -0.81
MDC1-205ENST00000425072 ARL2BPQ9Y2Y0 163 aa10□□□□□ -0.81
MDC1-205ENST00000425072 ENTPD2Q9Y5L3 495 aa10□□□□□ -0.81
MDC1-205ENST00000425072 USH1CQ9Y6N9 552 aa10□□□□□ -0.81
MDC1-205ENST00000425072 CABIN1Q9Y6J0 2220 aa10□□□□□ -0.81
MDC1-205ENST00000425072 FAM186AA6NE01 2351 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 TNRC6BQ9UPQ9 1833 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 UBFD1O14562 309 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 VPS4BO75351 444 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 ULK1O75385 1050 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 WFS1O76024 890 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 EPN2O95208 641 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 KRT6AP02538 564 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 KRT6BP04259 564 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 C1GALT1C1LP0DN25 315 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 TSPAN8P19075 237 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 HMOX2P30519 316 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 FASLGP48023 281 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 KRT6CP48668 564 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 ATXN3P54252 364 aaPredicted RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 UBE2IP63279 158 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 HHEXQ03014 270 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 PRDX1Q06830 199 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 BNIP3Q12983 259 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 CHIT1Q13231 466 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 KIR2DS3Q14952 304 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 NAA25Q14CX7 972 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 PLCL1Q15111 1095 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 TCEA2Q15560 299 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 SF1Q15637 639 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 ZXDCQ2QGD7 858 aaPredicted RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 TRIM61Q5EBN2 209 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 XKR6Q5GH73 641 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 PRAMEF13Q5VWM6 474 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 METTL21CQ5VZV1 264 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 LAIR1Q6GTX8 287 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 ARMC6Q6NXE6 501 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 TMEM26Q6ZUK4 368 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 RPS27LQ71UM5 84 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 C17orf64Q86WR6 236 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 C17orf82Q86X59 251 aaPredicted RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 LRRC56Q8IYG6 542 aaPredicted RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 CACNA2D3Q8IZS8 1091 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 KRT78Q8N1N4 520 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 SLC25A45Q8N413 288 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 TBC1D19Q8N5T2 526 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 L3MBTL4Q8NA19 623 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 CCDC197Q8NCU1 140 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 OR4F6Q8NGB9 312 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 SLC37A2Q8TED4 501 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 AGAP11Q8TF27 550 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 STON2Q8WXE9 905 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 REPS1Q96D71 796 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 PTCD3Q96EY7 689 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 SEC16BQ96JE7 1060 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 NSUN5Q96P11 429 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 SLC29A3Q9BZD2 475 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 SHCBP1LQ9BZQ2 653 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 PITHD1Q9GZP4 211 aaPredicted RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 EHD1Q9H4M9 534 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 GAREM1Q9H706 876 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 CAPN10Q9HC96 672 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 NPHS2Q9NP85 383 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 MRGBPQ9NV56 204 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 TRPS1Q9UHF7 1281 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 ADGRE2Q9UHX3 823 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 SNX7Q9UNH6 387 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 SNX6Q9UNH7 406 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 PCDHGA11Q9Y5H2 935 aa9.99□□□□□ -0.81
MDC1-205ENST00000425072 ATXN2Q99700 1313 aaKnown RBP9.99□□□□□ -0.81
MDC1-205ENST00000425072 A0A0G2JND7 137 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 RHPN2P1A8MT19 583 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ISM1B1AKI9 464 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 B4DGG1 531 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms