RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 COX15Q7KZN9 410 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 OTOAQ7RTW8 1153 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 CUZD1Q86UP6 607 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 TMEM151BQ8IW70 566 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 COG1Q8WTW3 980 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-205ENST00000423214 C1orf54Q8WWF1 131 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 RAD51AP1Q96B01 352 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 CNDP1Q96KN2 507 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 FOPNLQ96NB1 174 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 AGAP4Q96P64 663 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 MIPEPQ99797 713 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 TSGA10Q9BZW7 698 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 SLC26A1Q9H2B4 701 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 ZBTB20Q9HC78 741 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-205ENST00000423214 LZTFL1Q9NQ48 299 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 SEMA3GQ9NS98 782 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 IL1RAPL1Q9NZN1 696 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 MARCH4Q9P2E8 410 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-205ENST00000423214 CTSFQ9UBX1 484 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 NOVA2Q9UNW9 492 aaKnown RBP15.47■□□□□ 0.07
COL18A1-205ENST00000423214 ITPR2Q14571 2701 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 CRYBG3Q68DQ2 2970 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 CD3EAPO15446 510 aaKnown RBP15.46■□□□□ 0.07
COL18A1-205ENST00000423214 NDUFS3O75489 264 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 ERVK-10P10266 1014 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 ETS1P14921 441 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 PSMB5P28074 263 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 EIF3BP55884 814 aaKnown RBP15.46■□□□□ 0.07
COL18A1-205ENST00000423214 BASP1P80723 227 aaKnown RBP15.46■□□□□ 0.07
COL18A1-205ENST00000423214 NAA25Q14CX7 972 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 HIF1AQ16665 826 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 FAM214AQ32MH5 1076 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 PCID2Q5JVF3 399 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 CNSTQ6PJW8 725 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 PRUNE1Q86TP1 453 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 LRRC6Q86X45 466 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 SLC13A5Q86YT5 568 aaPredicted RBP15.46■□□□□ 0.07
COL18A1-205ENST00000423214 LRRC8AQ8IWT6 810 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 MPP5Q8N3R9 675 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 ZUFSPQ96AP4 578 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 CRB3Q9BUF7 120 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 CHRAC1Q9NRG0 131 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 TSR3Q9UJK0 312 aaKnown RBP15.46■□□□□ 0.07
COL18A1-205ENST00000423214 TTC7AQ9ULT0 858 aaPredicted RBP15.46■□□□□ 0.07
COL18A1-205ENST00000423214 RUVBL2Q9Y230 463 aaKnown RBP15.46■□□□□ 0.07
COL18A1-205ENST00000423214 NTNG1Q9Y2I2 539 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 CSAG2Q9Y5P2 127 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 HS3ST3B1Q9Y662 390 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 NFS1Q9Y697 457 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 CREBBPQ92793 2442 aa15.46■□□□□ 0.07
COL18A1-205ENST00000423214 TARM1B6A8C7 271 aa15.45■□□□□ 0.06
COL18A1-205ENST00000423214 CCNFP41002 786 aa15.45■□□□□ 0.06
COL18A1-205ENST00000423214 OR1D4P47884 311 aa15.45■□□□□ 0.06
COL18A1-205ENST00000423214 OCA2Q04671 838 aa15.45■□□□□ 0.06
COL18A1-205ENST00000423214 PARP9Q8IXQ6 854 aa15.45■□□□□ 0.06
COL18A1-205ENST00000423214 MAGEC3Q8TD91 643 aa15.45■□□□□ 0.06
COL18A1-205ENST00000423214 LHPPQ9H008 270 aa15.45■□□□□ 0.06
COL18A1-205ENST00000423214 EIF2B3Q9NR50 452 aaKnown RBP15.45■□□□□ 0.06
COL18A1-205ENST00000423214 MAU2Q9Y6X3 613 aa15.45■□□□□ 0.06
COL18A1-205ENST00000423214 FITM1A5D6W6 292 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 AP3B1O00203 1094 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 MAP2K7O14733 419 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 SRPX2O60687 465 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-205ENST00000423214 CTSVO60911 334 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 C1orf105O95561 183 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 CLDN1O95832 211 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 ONECUT2O95948 504 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 UQCRHP07919 91 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 CARSP49589 748 aaKnown RBP15.44■□□□□ 0.06
COL18A1-205ENST00000423214 CRADDP78560 199 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 CDC16Q13042 620 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 ZNF169Q14929 603 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-205ENST00000423214 RPS6KA1Q15418 735 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 WASHC2DQ5SRD0 308 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 MEI1Q5TIA1 1274 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 ZNF787Q6DD87 383 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 KIRREL2Q6UWL6 708 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 ST6GALNAC3Q8NDV1 305 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 OR2L3Q8NG85 312 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 DNAJB14Q8TBM8 379 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 THOC3Q96J01 351 aaKnown RBP15.44■□□□□ 0.06
COL18A1-205ENST00000423214 ZNF285Q96NJ3 590 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 IL22Q9GZX6 179 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 P2RY12Q9H244 342 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 ZNF304Q9HCX3 659 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 BFARQ9NZS9 450 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 SPATA7Q9P0W8 599 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 SCN2AQ99250 2005 aa15.44■□□□□ 0.06
COL18A1-205ENST00000423214 A0A0J9YVX5 310 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 HYKKA2RU49 373 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 KRT87PA6NCN2 255 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 PFDN6O15212 129 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 PRICKLE3O43900 615 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 EIF2S1P05198 315 aaKnown RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 CCDC175P0C221 793 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 ZSCAN5DPP0CG00 497 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 ACPPP15309 386 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 FBLP22087 321 aaKnown RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 RPS3P23396 243 aaKnown RBP eCLIP15.43■□□□□ 0.068e-18■■□□□ 11.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms