RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 OR2L3Q8NG85 312 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 SNIP1Q8TAD8 396 aaKnown RBP15.18■□□□□ 0.02
BRAT1-202ENST00000421712 KCNE4Q8WWG9 221 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 ANKRD7Q92527 254 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 EGFL8Q99944 293 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 TXLNGYQ9BZA5 131 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 ULBP3Q9BZM4 244 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 SLC7A5P2Q9GIP4 190 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 MRPS30Q9NP92 439 aaKnown RBP15.18■□□□□ 0.02
BRAT1-202ENST00000421712 TAC3Q9UHF0 121 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 SERTAD3Q9UJW9 196 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 IKZF3Q9UKT9 509 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 ACOT9Q9Y305 439 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 URB1O60287 2271 aaKnown RBP15.18■□□□□ 0.02
BRAT1-202ENST00000421712 A0A1W2PPV9 198 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 E7ENX8 843 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 STMND1H3BQB6 276 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 PRICKLE3O43900 615 aaPredicted RBP15.17■□□□□ 0.02
BRAT1-202ENST00000421712 CCNDBP1O95273 360 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 FKBP9O95302 570 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 GRIA3P42263 894 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 SERPINB8P50452 374 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 ATP6V0D1P61421 351 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 TAP2Q03519 686 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 NAE1Q13564 534 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 ZKSCAN8Q15776 578 aaPredicted RBP15.17■□□□□ 0.02
BRAT1-202ENST00000421712 AGTRAPQ6RW13 159 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 SBSNQ6UWP8 590 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 CDHR3Q6ZTQ4 885 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 ADAMTSL2Q86TH1 951 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 TMEM126BQ8IUX1 230 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 OR2A1Q8NGT9 310 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 ATL1Q8WXF7 558 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 ZUFSPQ96AP4 578 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 VPS11Q9H270 941 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 FAM60AQ9NP50 221 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 CCDC177Q9NQR7 707 aaPredicted RBP15.17■□□□□ 0.02
BRAT1-202ENST00000421712 SNX15Q9NRS6 342 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 NOVA2Q9UNW9 492 aaKnown RBP15.17■□□□□ 0.02
BRAT1-202ENST00000421712 FRYQ5TBA9 3013 aa15.17■□□□□ 0.02
BRAT1-202ENST00000421712 CEP295Q9C0D2 2601 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 A0A087X1B8 175 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 A0A096LPK6 155 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 KLK10O43240 276 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 KRT37O76014 449 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 STK17BO94768 372 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 C2P06681 752 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 ANXA5P08758 320 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 LTA4HP09960 611 aaKnown RBP15.16■□□□□ 0.02
BRAT1-202ENST00000421712 SLC35E2BP0CK96 405 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 FGF5P12034 268 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 CD1DP15813 335 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 CNTFP26441 200 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 GMPRP36959 345 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 EIF2S3P41091 472 aaKnown RBP15.16■□□□□ 0.02
BRAT1-202ENST00000421712 NAA25Q14CX7 972 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 ZIC1Q15915 447 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 DEFB110Q30KQ9 67 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 ICE2Q659A1 982 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 CAPN13Q6MZZ7 669 aaPredicted RBP15.16■□□□□ 0.02
BRAT1-202ENST00000421712 ADCK2Q7Z695 626 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 CCDC91Q7Z6B0 441 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 GPSM1Q86YR5 675 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 GPR135Q8IZ08 494 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 OR8K5Q8NH50 307 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 DCAKDQ8WVC6 231 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 EXT2Q93063 718 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 ZNF501Q96CX3 271 aaPredicted RBP15.16■□□□□ 0.02
BRAT1-202ENST00000421712 DPH7Q9BTV6 452 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 TWSG1Q9GZX9 223 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 NMRAL1Q9HBL8 299 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 ZNF180Q9UJW8 692 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 RNF112Q9ULX5 631 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 OARD1Q9Y530 152 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 ACACAQ13085 2346 aa15.16■□□□□ 0.02
BRAT1-202ENST00000421712 SNRNP200O75643 2136 aaKnown RBP15.16■□□□□ 0.02
BRAT1-202ENST00000421712 HMX2A2RU54 273 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 NCF1BA6NI72 391 aaPredicted RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 NCF1CA8MVU1 366 aaPredicted RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 TARM1B6A8C7 271 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 TRIM49D1C9J1S8 452 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 KIAA0754O94854 1291 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 WISP3O95389 354 aaPredicted RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 S100BP04271 92 aaPredicted RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 SNRPAP09012 282 aaKnown RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 LIPCP11150 499 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 NCF1P14598 390 aaPredicted RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 CCND1P24385 295 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 ITGA1P56199 1179 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 TBPL1P62380 186 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 PRDX1Q06830 199 aaKnown RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 TGIF1Q15583 401 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 ZC3H12BQ5HYM0 836 aaKnown RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 PRAMEF13Q5VWM6 474 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 FCRL6Q6DN72 434 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 PWWP2BQ6NUJ5 590 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 KLC3Q6P597 504 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 MCATQ8IVS2 390 aaKnown RBP15.15■□□□□ 0.02
BRAT1-202ENST00000421712 IL22RA1Q8N6P7 574 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms