RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TMEM151BQ8IW70 566 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 ZADH2Q8N4Q0 377 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 SKA2Q8WVK7 121 aaPredicted RBP16.63■□□□□ 0.25
MSH6-203ENST00000420813 SNRNP40Q96DI7 357 aaKnown RBP16.63■□□□□ 0.25
MSH6-203ENST00000420813 TCF12Q99081 682 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 ILKAPQ9H0C8 392 aaPredicted RBP16.63■□□□□ 0.25
MSH6-203ENST00000420813 SPATA7Q9P0W8 599 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 PLEKHB1Q9UF11 243 aaPredicted RBP16.63■□□□□ 0.25
MSH6-203ENST00000420813 NFS1Q9Y697 457 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 FAM169AQ9Y6X4 670 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 POLEQ07864 2286 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 UNC79Q9P2D8 2635 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 H3BMM5 538 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 PFDN6O15212 129 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 CTSVO60911 334 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 DDAH2O95865 285 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 MCM3P25205 808 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 ARNTP27540 789 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 BDKRB1P46663 353 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 ADARP55265 1226 aaKnown RBP16.62■□□□□ 0.25
MSH6-203ENST00000420813 GBX1Q14549 363 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 CTSL3PQ5NE16 218 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 PRAMEF13Q5VWM6 474 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 LRRC8BQ6P9F7 803 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 Q6ZS92 163 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 SDCCAG8Q86SQ7 713 aaPredicted RBP16.62■□□□□ 0.25
MSH6-203ENST00000420813 OTUD6BQ8N6M0 293 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 OR2L3Q8NG85 312 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 OR2A1Q8NGT9 310 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 LPGAT1Q92604 370 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 C19orf60Q96EN9 201 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 MFSD3Q96ES6 412 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 VPS50Q96JG6 964 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 BIRC8Q96P09 236 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 SLC6A20Q9NP91 592 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 HOMER3Q9NSC5 361 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 SYBUQ9NX95 663 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 CDC23Q9UJX2 597 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 FBXL4Q9UKA2 621 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 SOX13Q9UN79 622 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 HS3ST3B1Q9Y662 390 aa16.62■□□□□ 0.25
MSH6-203ENST00000420813 NBPF19A0A087WUL8 3843 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 SOCS6O14544 535 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 VAPBO95292 243 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 MATN4O95460 622 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 FGGP02679 453 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 ESR1P03372 595 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 ITGA3P26006 1051 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 MGAT1P26572 445 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 PSMB5P28074 263 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 EIF2S3LQ2VIR3 472 aaKnown RBP16.61■□□□□ 0.25
MSH6-203ENST00000420813 CCSMST1Q4G0I0 132 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 C4orf17Q53FE4 359 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 CRB2Q5IJ48 1285 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 CNSTQ6PJW8 725 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 RNF44Q7L0R7 432 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 INPP5DQ92835 1189 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 MIPEPQ99797 713 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 SEMA3GQ9NS98 782 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 ASF1BQ9NVP2 202 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 ZGRF1Q86YA3 2104 aa16.61■□□□□ 0.25
MSH6-203ENST00000420813 TEX15Q9BXT5 2789 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 SVILO95425 2214 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 A0A1W2PPV9 198 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 HYKKA2RU49 373 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 VSTM2BA6NLU5 285 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 MASP2O00187 686 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 CBX6O95503 412 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 ERGP11308 486 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 OGNP20774 298 aaKnown RBP16.6■□□□□ 0.25
MSH6-203ENST00000420813 VSX2P58304 361 aaPredicted RBP16.6■□□□□ 0.25
MSH6-203ENST00000420813 NR6A1Q15406 480 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 WASHC2DQ5SRD0 308 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 IRAK1BP1Q5VVH5 260 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 KIAA0930Q6ICG6 404 aaPredicted RBP16.6■□□□□ 0.25
MSH6-203ENST00000420813 PRMT9Q6P2P2 845 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 KIRREL2Q6UWL6 708 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 IGFL2Q6UWQ7 119 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 CISD2Q8N5K1 135 aaKnown RBP16.6■□□□□ 0.25
MSH6-203ENST00000420813 PRR7Q8TB68 274 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 PPP4R1Q8TF05 950 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 COG1Q8WTW3 980 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.6■□□□□ 0.25
MSH6-203ENST00000420813 BARD1Q99728 777 aaKnown RBP16.6■□□□□ 0.25
MSH6-203ENST00000420813 ZBTB20Q9HC78 741 aaPredicted RBP16.6■□□□□ 0.25
MSH6-203ENST00000420813 CTSFQ9UBX1 484 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 RUVBL2Q9Y230 463 aaKnown RBP16.6■□□□□ 0.25
MSH6-203ENST00000420813 PCDHGA10Q9Y5H3 936 aa16.6■□□□□ 0.25
MSH6-203ENST00000420813 OR2A25A4D2G3 310 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 PHF2O75151 1096 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 NIPSNAP2O75323 286 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 CCDC175P0C221 793 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 CMPK1P30085 196 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 FMO4P31512 558 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 MAGEA6P43360 314 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 OR1D4P47884 311 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 KCNJ1P48048 391 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 EMP3P54852 163 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 SARNPP82979 210 aaKnown RBP16.59■□□□□ 0.25
MSH6-203ENST00000420813 RBBP7Q16576 425 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms