RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 OTX2P32243 289 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 CCNFP41002 786 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 PGDP52209 483 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 CTBP1Q13363 440 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 DHX34Q14147 1143 aaKnown RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 SSPNQ14714 243 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 SF1Q15637 639 aaKnown RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 ZNF470Q6ECI4 717 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 FRMPD2BQ6IN97 320 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 MED25Q71SY5 747 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 RNF44Q7L0R7 432 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 PPP1R32Q7Z5V6 425 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 SDCCAG8Q86SQ7 713 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 TMEM102Q8N9M5 508 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 Q8NA96 180 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 OR2L3Q8NG85 312 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 ACTRT1Q8TDG2 376 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 ZUFSPQ96AP4 578 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 ZNF669Q96BR6 464 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 SPSB2Q99619 263 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 MIPEPQ99797 713 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 XAB2Q9HCS7 855 aaKnown RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 SLC6A20Q9NP91 592 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 INTS10Q9NVR2 710 aaKnown RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 SPATA7Q9P0W8 599 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 IFT80Q9P2H3 777 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 TSR3Q9UJK0 312 aaKnown RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 PADI2Q9Y2J8 665 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 PTRH2Q9Y3E5 179 aaKnown RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 HIVEP3Q5T1R4 2406 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 SPTAN1Q13813 2472 aaKnown RBP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 LOC105369274A0A096LPK9 316 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 IGKV1-8A0A0C4DH67 115 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 LOC102723532A0A0G2JNH3 316 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 A0A1B0GX78 115 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 OR2A25A4D2G3 310 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 SDR42E2A6NKP2 422 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 MYO1CO00159 1063 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 DSCR3O14972 297 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 KIF5CO60282 957 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 USP1O94782 785 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 PAMP19021 973 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 CHRM3P20309 590 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 SLC1A2P43004 574 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 SARNPP82979 210 aaKnown RBP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 TIAL1Q01085 375 aaKnown RBP eCLIP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 KLHL38Q2WGJ6 581 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 DCAF10Q5QP82 559 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 RNASEH2BQ5TBB1 312 aaKnown RBP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 CASC4Q6P4E1 433 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 CYHR1Q6ZMK1 362 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 TTLL10Q6ZVT0 673 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 RAB43Q86YS6 212 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 OR4N4Q8N0Y3 316 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 RBMXL3Q8N7X1 1067 aaKnown RBP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 OR9A1PQ8NGU1 263 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 SKA2Q8WVK7 121 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 FKBP10Q96AY3 582 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 SMAD5Q99717 465 aaKnown RBP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 C17orf62Q9BQA9 187 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 NDC1Q9BTX1 674 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 SLC26A1Q9H2B4 701 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 FBXO6Q9NRD1 293 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 CUTCQ9NTM9 273 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 TXLNGQ9NUQ3 528 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 INTS7Q9NVH2 962 aaKnown RBP10.57□□□□□ -0.72
SSBP3-206ENST00000420121 SNX12Q9UMY4 172 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 PCDHGB7Q9Y5F8 929 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 MRFAP1Q9Y605 127 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 NAV2Q8IVL1 2488 aa10.57□□□□□ -0.72
SSBP3-206ENST00000420121 MAGEB16A2A368 324 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 A6NL46 340 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 CES2O00748 559 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 IVDP26440 423 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 FOLR3P41439 243 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 FNTAP49354 379 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 ARSFP54793 590 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 RRADP55042 308 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 SOX8P57073 446 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 MPP1Q00013 466 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 CUL1Q13616 776 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 NKG7Q16617 165 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 PRR30Q53SZ7 412 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-206ENST00000420121 ZC3H12BQ5HYM0 836 aaKnown RBP10.56□□□□□ -0.72
SSBP3-206ENST00000420121 TCTE1Q5JU00 501 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 YOD1Q5VVQ6 348 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-206ENST00000420121 FBXO42Q6P3S6 717 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 TTC23LQ6PF05 361 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 SUSD1Q6UWL2 747 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 NEK10Q6ZWH5 1172 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 OVCH1Q7RTY7 1134 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 LRRC56Q8IYG6 542 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-206ENST00000420121 FBXO15Q8NCQ5 510 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-206ENST00000420121 GSDMBQ8TAX9 411 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 CD200R1Q8TD46 325 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 ZNF480Q8WV37 535 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 DLG3Q92796 817 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 KCNJ9Q92806 393 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms