RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SLC30A9Q6PML9 568 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 IL27RAQ6UWB1 636 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 C6orf89Q6UWU4 347 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 RPS27LQ71UM5 84 aaKnown RBP13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 MILR1Q7Z6M3 343 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 TAF8Q7Z7C8 310 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 SLC9B2Q86UD5 537 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 SYTL1Q8IYJ3 562 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 NAGSQ8N159 534 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 ABHD11Q8NFV4 315 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 OR4F6Q8NGB9 312 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 OR52E1Q8NGJ3 308 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 RFWD2Q8NHY2 731 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 USP7Q93009 1102 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 ELF4Q99607 663 aaPredicted RBP13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 TNFRSF12AQ9NP84 129 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 TMEM74BQ9NUR3 256 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 IMP3Q9NV31 184 aaKnown RBP13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 DLL3Q9NYJ7 618 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 CPNE7Q9UBL6 633 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 PCDHGA5Q9Y5G8 931 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 KLK4Q9Y5K2 254 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 KCNE1BA0A087WTH5 132 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 A0A1B0GTL3 188 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 A0A1W2PPV9 198 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 H0YIV9 168 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 CHEK2O96017 543 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 HGFP14210 728 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 JUPP14923 745 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRDX3P30048 256 aaKnown RBP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 DHPSP49366 369 aaPredicted RBP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 ARRB1P49407 418 aaPredicted RBP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 IDH3AP50213 366 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 ABATP80404 500 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 LAPTM5Q13571 262 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 PUM1Q14671 1186 aaKnown RBP eCLIP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 KIF19Q2TAC6 998 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 SMU1Q2TAY7 513 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 ATG9BQ674R7 924 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 SLC23A3Q6PIS1 610 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 SLCO4C1Q6ZQN7 724 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRR23BQ6ZRT6 265 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 TRIM46Q7Z4K8 759 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 LINC01555Q8NAE3 123 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 ZNF548Q8NEK5 533 aaPredicted RBP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 OR4K1Q8NGD4 311 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 SLC22A18Q96BI1 424 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 CXorf40BQ96DE9 158 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 METTL2AQ96IZ6 378 aaKnown RBP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 SARGQ9BW04 601 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 TMEM120AQ9BXJ8 343 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 ATG10Q9H0Y0 220 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 CAPN10Q9HC96 672 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 PPT2Q9UMR5 302 aa13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 CFAP20Q9Y6A4 193 aaKnown RBP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 TNRC6BQ9UPQ9 1833 aaKnown RBP13.79□□□□□ -0.2
SHMT1P1-201ENST00000419974 CACNA1AO00555 2505 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 A0A0G2JND7 137 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 A0A1B0GVT2 93 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 CLGNO14967 610 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 SCAMP1O15126 338 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 YY2O15391 372 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRAMEF4O60810 478 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 DCTN3O75935 186 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 ADSLP30566 484 aaPredicted RBP13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 BNC1Q01954 994 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 RELAQ04206 551 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 BTKQ06187 659 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRDX1Q06830 199 aaKnown RBP13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRKG2Q13237 762 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 TUBB3Q13509 450 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 KRT33BQ14525 404 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 RBBP7Q16576 425 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 FBXO48Q5FWF7 155 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 XKR7Q5GH72 579 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRAMEF14Q5SWL7 426 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRAMEF9Q5VWM5 478 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRAMEF13Q5VWM6 474 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 GRHL2Q6ISB3 625 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 CEP68Q76N32 757 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 AMIGO1Q86WK6 493 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 ZDHHC1Q8WTX9 485 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 ATP6V1E2Q96A05 226 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 SH3KBP1Q96B97 665 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PYCR2Q96C36 320 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PTCD3Q96EY7 689 aaKnown RBP13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 EFCAB11Q9BUY7 163 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 NT5DC2Q9H857 520 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PELI2Q9HAT8 420 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 ACSS2Q9NR19 701 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 MARCOQ9UEW3 520 aaPredicted RBP13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 DCTN4Q9UJW0 460 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 ICKQ9UPZ9 632 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 PCDHB11Q9Y5F2 797 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 ENTPD2Q9Y5L3 495 aa13.78□□□□□ -0.2
SHMT1P1-201ENST00000419974 LAMA1P25391 3075 aa13.77□□□□□ -0.2
SHMT1P1-201ENST00000419974 A0A1B0GTQ1 180 aa13.77□□□□□ -0.21
SHMT1P1-201ENST00000419974 CCDC22O60826 627 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms