RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 AQP9O43315 295 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 KIR3DL1P43629 444 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 GABRB2P47870 512 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 CLCQ05315 142 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 NDUFA5Q16718 116 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 TRMT5Q32P41 509 aaKnown RBP16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 AADATQ8N5Z0 425 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 CSNK1A1LQ8N752 337 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 ASB15Q8WXK1 588 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 TRMOQ9BU70 441 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 LRIT1Q9P2V4 623 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 EPHA6Q9UF33 1036 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 ZFR2Q9UPR6 939 aaKnown RBP16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 TSC22D4Q9Y3Q8 395 aa16.52■□□□□ 0.23
SYNGAP1-202ENST00000418600 ELOA3DA6NLF2 546 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 BRINP1O60477 761 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 MED26O95402 600 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 LDLRP01130 860 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 PRG2P13727 222 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 PTX3P26022 381 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 GRK6P43250 576 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 RAB8AP61006 207 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ELOA3BQ3SY89 546 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ARMC4Q5T2S8 1044 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 NPAS3Q8IXF0 933 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ELOA3Q8NG57 546 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 REXO4Q9GZR2 422 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 USP29Q9HBJ7 922 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 RAP2CQ9Y3L5 183 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 NIPSNAP2O75323 286 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 TGFB1P01137 390 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ZNF730Q6ZMV8 503 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ATG14Q6ZNE5 492 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ART4Q93070 314 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 SCAMP4Q969E2 229 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ARRDC3Q96B67 414 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 SLC25A36Q96CQ1 311 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ULBP3Q9BZM4 244 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 RUVBL1Q9Y265 456 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 SOBPA7XYQ1 873 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 SLC22A3O75751 556 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 MYCLP1P12525 358 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 TUBB3Q13509 450 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ENPP2Q13822 863 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 HERC3Q15034 1050 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 PLEKHS1Q5SXH7 462 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 CENPIQ92674 756 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 DAZLQ92904 295 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 NKIRAS2Q9NYR9 191 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 RBM7Q9Y580 266 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 FAM86C2PA6NEL3 165 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 K7EPI3 171 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 SRCP12931 536 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 TCN2P20062 427 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 NDUFAF6Q330K2 333 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ZCCHC12Q6PEW1 402 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 LRRTM3Q86VH5 581 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 RIBC2Q9H4K1 309 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 NLE1Q9NVX2 485 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 PPM1HQ9ULR3 514 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 PCDH7O60245 1069 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 CDC123O75794 336 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 IL6P05231 212 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 ABHD2P08910 425 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 GBX1Q14549 363 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 TAB1Q15750 504 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 MAPK14Q16539 360 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 TIMM50Q3ZCQ8 353 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 THAP3Q8WTV1 239 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 TRAF6Q9Y4K3 522 aa16.51■□□□□ 0.23
SYNGAP1-202ENST00000418600 A0A0J9YYE9 177 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 RPLP0P05388 317 aaKnown RBP16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 BMP6P22004 513 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 EPS8Q12929 822 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 C3orf38Q5JPI3 329 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 FAM69BQ5VUD6 431 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 TCEAL6Q6IPX3 200 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 MZT2AQ6P582 158 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 KLHDC10Q6PID8 442 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 LRMDAQ9H2I8 198 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 DCLRE1BQ9H816 532 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 MRPL39Q9NYK5 338 aaKnown RBP16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 K7ERQ8 282 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 PROZP22891 400 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 PKNOX1P55347 436 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 RPS15AP62244 130 aaKnown RBP16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 HSF2Q03933 536 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 PAFAH1B3Q15102 231 aaKnown RBP16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 SMU1Q2TAY7 513 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 BTN2A1Q7KYR7 527 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 CHST14Q8NCH0 376 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 ZNF483Q8TF39 744 aaPredicted RBP16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 FOXQ1Q9C009 403 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 UROSP10746 265 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 CD247P20963 164 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 IRAK1P51617 712 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 GALNT2Q10471 571 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 DSC3Q14574 896 aa16.5■□□□□ 0.23
SYNGAP1-202ENST00000418600 FBXO48Q5FWF7 155 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms