RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 HMGCLL1Q8TB92 370 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 IFT81Q8WYA0 676 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 FIG4Q92562 907 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 TAAR8Q969N4 342 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 RHBDF1Q96CC6 855 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 TLCD1Q96CP7 247 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 IGSF21Q96ID5 467 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 EGLN2Q96KS0 407 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 QRFPRQ96P65 431 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 RAB3IPQ96QF0 476 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 XPO6Q96QU8 1125 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 SPAG5Q96R06 1193 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 KRT12Q99456 494 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 SH3GL3Q99963 347 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 TMEM109Q9BVC6 243 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 MXD3Q9BW11 206 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ROPN1BQ9BZX4 212 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 TRIM9Q9C026 710 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 TRIM7Q9C029 511 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 TMX4Q9H1E5 349 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 SLCO5A1Q9H2Y9 848 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 GHITMQ9H3K2 345 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CENPHQ9H3R5 247 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 PLK3Q9H4B4 646 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 MAGIXQ9H6Y5 334 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ROPN1Q9HAT0 212 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 SETD4Q9NVD3 440 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 MTMR10Q9NXD2 777 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 AIPL1Q9NZN9 384 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 SUCLA2Q9P2R7 463 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 FBXL17Q9UF56 701 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 MTRF1LQ9UGC7 380 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 RASAL2Q9UJF2 1139 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 VPS28Q9UK41 221 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 FBXL5Q9UKA1 691 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 FBXL2Q9UKC9 423 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 KCNS2Q9ULS6 477 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 RPL26L1Q9UNX3 145 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 KLHL20Q9Y2M5 609 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 C15orf41Q9Y2V0 281 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ATP6V0A2Q9Y487 856 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 AFF2P51816 1311 aa2.59□□□□□ -2
VPS41-206ENST00000418457 C10orf71Q711Q0 1435 aa2.59□□□□□ -2
VPS41-206ENST00000418457 ITGB4P16144 1822 aa2.58□□□□□ -2
VPS41-206ENST00000418457 BAZ2AQ9UIF9 1905 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 IGHV4OR15-8A0A075B7B6 117 aa2.58□□□□□ -2
VPS41-206ENST00000418457 ESYT2A0FGR8 921 aa2.58□□□□□ -2
VPS41-206ENST00000418457 MIF4GDA9UHW6 222 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 F8VZ95 297 aa2.58□□□□□ -2
VPS41-206ENST00000418457 DNM1LO00429 736 aa2.58□□□□□ -2
VPS41-206ENST00000418457 SLC16A5O15375 505 aa2.58□□□□□ -2
VPS41-206ENST00000418457 OGG1O15527 345 aa2.58□□□□□ -2
VPS41-206ENST00000418457 KCNN4O15554 427 aa2.58□□□□□ -2
VPS41-206ENST00000418457 RAD51CO43502 376 aa2.58□□□□□ -2
VPS41-206ENST00000418457 AHCYL1O43865 530 aa2.58□□□□□ -2
VPS41-206ENST00000418457 DDNO94850 711 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 PLEKHA8P1O95397 391 aa2.58□□□□□ -2
VPS41-206ENST00000418457 GGPS1O95749 300 aa2.58□□□□□ -2
VPS41-206ENST00000418457 ICAM1P05362 532 aa2.58□□□□□ -2
VPS41-206ENST00000418457 VIMP08670 466 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 OR52Z1P0C646 297 aa2.58□□□□□ -2
VPS41-206ENST00000418457 PDHBP11177 359 aa2.58□□□□□ -2
VPS41-206ENST00000418457 NEFHP12036 1026 aa2.58□□□□□ -2
VPS41-206ENST00000418457 ACADLP28330 430 aa2.58□□□□□ -2
VPS41-206ENST00000418457 CORO1AP31146 461 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 HOXA13P31271 388 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 HOXD13P35453 343 aa2.58□□□□□ -2
VPS41-206ENST00000418457 GCKP35557 465 aa2.58□□□□□ -2
VPS41-206ENST00000418457 APOBEC1P41238 236 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 PRKCIP41743 596 aa2.58□□□□□ -2
VPS41-206ENST00000418457 EPS15P42566 896 aa2.58□□□□□ -2
VPS41-206ENST00000418457 SLC1A4P43007 532 aa2.58□□□□□ -2
VPS41-206ENST00000418457 BRWD1-AS2P59051 145 aa2.58□□□□□ -2
VPS41-206ENST00000418457 FKBP3Q00688 224 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 CREB5Q02930 508 aa2.58□□□□□ -2
VPS41-206ENST00000418457 EEF1A2Q05639 463 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 GFPT1Q06210 699 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 KLHL30Q0D2K2 578 aa2.58□□□□□ -2
VPS41-206ENST00000418457 SREBF2Q12772 1141 aa2.58□□□□□ -2
VPS41-206ENST00000418457 RBBP5Q15291 538 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 PPP1R7Q15435 360 aa2.58□□□□□ -2
VPS41-206ENST00000418457 MYLK3Q32MK0 819 aa2.58□□□□□ -2
VPS41-206ENST00000418457 KRT71Q3SY84 523 aa2.58□□□□□ -2
VPS41-206ENST00000418457 DUSP28Q4G0W2 176 aa2.58□□□□□ -2
VPS41-206ENST00000418457 PARP10Q53GL7 1025 aa2.58□□□□□ -2
VPS41-206ENST00000418457 LCE1AQ5T7P2 110 aa2.58□□□□□ -2
VPS41-206ENST00000418457 KRT79Q5XKE5 535 aa2.58□□□□□ -2
VPS41-206ENST00000418457 RUSC1-AS1Q66K80 236 aa2.58□□□□□ -2
VPS41-206ENST00000418457 C18orf63Q68DL7 685 aa2.58□□□□□ -2
VPS41-206ENST00000418457 TTC19Q6DKK2 380 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 TRNP1Q6NT89 227 aa2.58□□□□□ -2
VPS41-206ENST00000418457 PAPD4Q6PIY7 484 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 SPSB3Q6PJ21 355 aa2.58□□□□□ -2
VPS41-206ENST00000418457 BRAT1Q6PJG6 821 aa2.58□□□□□ -2
VPS41-206ENST00000418457 CLEC4GQ6UXB4 293 aa2.58□□□□□ -2
VPS41-206ENST00000418457 UNQ6126/PRO20091Q6UXV3 157 aa2.58□□□□□ -2
VPS41-206ENST00000418457 CFAP77Q6ZQR2 320 aa2.58□□□□□ -2
VPS41-206ENST00000418457 FASTKD5Q7L8L6 764 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 TRPM8Q7Z2W7 1104 aa2.58□□□□□ -2
VPS41-206ENST00000418457 SLFN11Q7Z7L1 901 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms