RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CCDC77Q9BR77 488 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 FRMD8Q9BZ67 464 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZYG11BQ9C0D3 744 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HIPK2Q9H2X6 1198 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 PABPC3Q9H361 631 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 CDCP1Q9H5V8 836 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 VPS37BQ9H9H4 285 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 SAYSD1Q9NPB0 183 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 ETNK2Q9NVF9 386 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HAUS2Q9NVX0 235 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 MTMR10Q9NXD2 777 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 FNIP2Q9P278 1114 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 BCCIPQ9P287 314 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 OR12D3Q9UGF7 316 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 RSPH14Q9UHP6 348 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 XPO7Q9UIA9 1087 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 LSM7Q9UK45 103 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 VANGL2Q9ULK5 521 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC8A2Q9UPR5 921 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 MAN2B2Q9Y2E5 1009 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 HBS1LQ9Y450 684 aaKnown RBP3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 MFHAS1Q9Y4C4 1052 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 TTLL3Q9Y4R7 772 aa3.8□□□□□ -1.8
HMGB3P20-201ENST00000417997 TRAV19A0A0A6YYK7 116 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 EXOC1LA0A1B0GW35 172 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 A0A1W2PPC4 97 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM92AA1XBS5 289 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 DPPA5A6NC42 116 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ARHGAP42A6NI28 874 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM90A8PA6NJQ4 464 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 HMGB1P1B2RPK0 211 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 F5H423 210 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM72CH0Y354 149 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 TEX28O15482 410 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 RGS16O15492 202 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 RIPK2O43353 540 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ACSL4O60488 711 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMEM63AO94886 807 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 SEC24AO95486 1093 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CXCL14O95715 111 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 TOMM40O96008 361 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ENO1P06733 434 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 APRTP07741 180 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CNPP09543 421 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 NUDT17P0C025 328 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM90A13PP0C7W8 464 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM90A24PP0C7X0 464 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 TPSB2P20231 275 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 TNFRSF1BP20333 461 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PSMB4P28070 264 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 GABRR2P28476 465 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CDC25CP30307 473 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CORO1AP31146 461 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 HOXC13P31276 330 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 GARSP41250 739 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 MAGEA4P43358 317 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 SOX2P48431 317 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 THBS3P49746 956 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PGFP49763 221 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 TUBP50607 506 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 NANOS2P60321 138 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 UBE3AQ05086 875 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 GAD2Q05329 585 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PPIDQ08752 370 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 GALNT2Q10471 571 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PMS2P11Q13670 270 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 KCNJ11Q14654 390 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PTGR1Q14914 329 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 TPSAB1Q15661 275 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 INPP5JQ15735 1006 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 UAP1Q16222 522 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 MS4A13Q5J8X5 152 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 RABGAP1LQ5R372 815 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PPM1LQ5SGD2 360 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANKRD20A2Q5SQ80 823 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 SYCP2LQ5T4T6 812 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM72AQ5TYM5 149 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANKRD20A1Q5TYW2 823 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 AGBL2Q5U5Z8 902 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANKRD20A3Q5VUR7 823 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANKRD22Q5VYY1 191 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM72DQ6L9T8 149 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ACSM6Q6P461 480 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 KIAA0408Q6ZU52 694 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PID1Q7Z2X4 250 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM72BQ86X60 149 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCDC117Q8IWD4 279 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 LGI2Q8N0V4 545 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 BBS5Q8N3I7 341 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ARFGAP2Q8N6H7 521 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 NPWQ8N729 165 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 RNF152Q8N8N0 203 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 NAT8LQ8N9F0 302 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FBXO36Q8NEA4 188 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM76AQ8TAV0 307 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PYROXD1Q8WU10 500 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 DEPDC1BQ8WUY9 529 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 POF1BQ8WVV4 589 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms